Pre_GI: BLASTP Hits

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Query: NC_011094:25762:38774 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 38774, End: 39535, Length: 762

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:25758:387733877339546774Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein3e-146517
NC_016857:25803:387733877339546774Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane/exported protein3e-146517
NC_011080:25751:387663876639527762Salmonella enterica subsp. enterica serovar Newport str. SL254,putative outer membrane/exported protein4e-146516
NC_003197:25803:387733877339534762Salmonella typhimurium LT2, complete genomeputative outer membrane/exported protein4e-146516
NC_006511:25796:387633876339524762Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-146516
NC_011149:25760:387723877239533762Salmonella enterica subsp. enterica serovar Agona str. SL483,putative outer membrane/exported protein4e-146516
NC_011147:25836:388033880339564762Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-146516
NC_011205:25805:387743877439535762Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853outer membrane/hypothetical protein4e-146516
NC_011294:25569:385303853039291762Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-146516
NC_016810:25803:387733877339534762Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-146516
NC_016831:25760:387743877439535762Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-146516
NC_016856:25803:387733877339534762Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane/exported protein4e-146516
NC_016860:25758:387733877339534762Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein4e-146516
NC_016863:25804:387743877439535762Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane/exported protein4e-146516
NC_011274:25692:386613866139422762Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-145514
NC_003198:25807:387733877339534762Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-145513
NC_004631:25807:387733877339534762Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-145513
NC_016832:25807:387733877339534762Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein4e-145513
NC_010067:2881448:288792728879272888700774Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-143508
NC_009436:1648159:165969416596941660449756Enterobacter sp. 638, complete genomehypothetical protein3e-87321
NC_011750:12047:160501605016811762Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-77287
NC_010102:25893:351603516035762603Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-66252