Pre_GI: BLASTP Hits

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Query: NC_011094:25762:34380 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 34380, End: 34817, Length: 438

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:25836:344093440934846438Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator4e-76282
NC_006511:25796:343693436934806438Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcription regulator4e-76282
NC_011080:25751:343693436934809441Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-75280
NC_016810:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-75280
NC_016856:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-75280
NC_016857:25803:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-75280
NC_016860:25758:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-75280
NC_016863:25804:343773437734817441Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-75280
NC_003197:25803:343763437634816441Salmonella typhimurium LT2, complete genomeputative transcriptional regulator8e-75278
NC_011149:25760:343783437834815438Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcription regulator8e-75278
NC_017046:25758:343763437634816441Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-75278
NC_016831:25760:343773437734817441Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-74277
NC_011294:25569:341333413334573441Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-74277
NC_011274:25692:342643426434704441Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-74277
NC_011205:25805:343773437734817441Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator2e-74277
NC_010067:2881448:289265828926582893089432Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-63239
NC_016832:25807:345113451134816306Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transcriptional regulator2e-48190
NC_003198:25807:345113451134816306Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator2e-48190
NC_004631:25807:345113451134816306Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator2e-48190
NC_016612:2223357:223653822365382236981444Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-27119
NC_010067:2881448:289446828944682894917450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-26115
NC_016860:25758:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator6e-25112
NC_016857:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator6e-25112
NC_016856:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator6e-25112
NC_016810:25803:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-25112
NC_003197:25803:325453254532994450Salmonella typhimurium LT2, complete genomeputative transcriptional regulator6e-25112
NC_011147:25836:325783257833027450Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-25112
NC_006511:25796:325383253832987450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein8e-25112
NC_011094:25762:325493254932998450Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-24112
NC_016863:25804:325463254632995450Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator6e-25112
NC_017046:25758:325453254532994450Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-25112
NC_011080:25751:325383253832987450Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-25112
NC_011149:25760:325473254732996450Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein6e-25112
NC_016832:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-25112
NC_016831:25760:325463254632995450Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-25112
NC_011294:25569:323103231032759450Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-25112
NC_011274:25692:324333243332882450Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-25112
NC_011205:25805:325463254632995450Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-25112
NC_003198:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-25112
NC_004631:25807:325493254932998450Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-25112
NC_010102:25893:326333263333082450Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-24110
NC_016832:25807:343803438034535156Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transcriptional regulator4e-1890.1
NC_014306:1981956:199196619919661992739774Erwinia billingiae Eb661, complete genomePutative response regulator4e-0753.5
NC_020063:3690308:372029837202983721065768Enterobacteriaceae bacterium strain FGI 57, complete genomeDNA-binding protein with winged-HTH domain6e-0753.1
NC_013941:1314158:132417513241751324987813Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-0652
NC_013008:1271621:128205512820551282867813Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-0652
NC_011353:1271335:128176912817691282581813Escherichia coli O157:H7 str. EC4115 chromosome, complete genometranscriptional regulator1e-0652
NC_002655:1413244:142326314232631424075813Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0652
NC_002695:1329472:133949113394911340303813Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator1e-0652
NC_013716:3708415:371423337142333714961729Citrobacter rodentium ICC168, complete genomeputative transcriptional regulator2e-0651.2
NC_021066:3769405:377676637767663777620855Raoultella ornithinolytica B6, complete genometranscriptional regulator3e-0650.4