Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2131676 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2131676, End: 2132209, Length: 534

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:3827211:383902838390283839669642Bordetella bronchiseptica RB50, complete genomehypothetical protein2e-1065.1
NC_002937:255790:256925256925257563639Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completephage baseplate assembly protein V, putative1e-1685.9
NC_002937:2933000:295332229533222953960639Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completephage baseplate assembly protein V, putative1e-1686.3
NC_009436:2776410:279203427920342792576543Enterobacter sp. 638, complete genomephage baseplate assembly protein V1e-63241
NC_014306:3524980:353977935397793540378600Erwinia billingiae Eb661, complete genomePhage-related baseplate assembly protein1e-0859.3
NC_008563:2909945:292530129253012925849549Escherichia coli APEC O1, complete genomebacteriophage V tail protein8e-59226
NC_009800:2049346:207211820721182072699582Escherichia coli HS, complete genomebacteriophage Mu Gp45 protein4e-1684
NC_011750:2928990:294209829420982942646549Escherichia coli IAI39 chromosome, complete genomeputative baseplate assembly phage protein1e-57221
NC_011742:2823000:284261128426112843159549Escherichia coli S88 chromosome, complete genomebaseplate assembly phage protein8e-59226
NC_007946:2894793:291027429102742910822549Escherichia coli UTI89, complete genomebacteriophage V tail protein8e-59226
NC_011740:621408:622487622487623035549Escherichia fergusonii ATCC 35469, complete genomeputative baseplate assembly phage protein2e-59228
NC_000907:1568867:158827715882771588825549Haemophilus influenzae Rd KW20, complete genomehypothetical protein3e-1168.2
NC_002947:4362271:438590643859064386406501Pseudomonas putida KT2440, complete genomephage assembly protein, putative1e-23108
NC_015733:1398083:139808313980831398583501Pseudomonas putida S16 chromosome, complete genomePhage assembly protein2e-24112
NC_011205:2137696:215301821530182153551534Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage Mu Gp45 protein6e-100362
NC_011294:2009388:202471120247112025244534Salmonella enterica subsp. enterica serovar Enteritidis strphage baseplate protein5e-99359
NC_010102:1779707:180427918042791804812534Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-100363
NC_016810:2027311:204599420459942046527534Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage baseplate protein6e-100362
NC_016856:2085283:209983120998312100364534Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative base plate assembly protein6e-100362
NC_017046:2026672:204535520453552045888534Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage baseplate protein6e-100362
NC_016857:2027311:204599420459942046527534Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative base plate assembly protein6e-100362
NC_016863:2029340:204802320480232048556534Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-100362
NC_008258:269806:270885270885271433549Shigella flexneri 5 str. 8401, complete genometail protein2e-57221
NC_007712:4023516:403477740347774035328552Sodalis glossinidius str. 'morsitans', complete genomephage assembly protein5e-28123
NC_007712:1182518:119662311966231197189567Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-34144
NC_016628:373815:395011395011395586576Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage baseplate assembly protein2e-0755.5
NC_014228:3282500:331026233102623310807546Xenorhabdus nematophila ATCC 19061, complete genomeputative baseplate assembly protein1e-1375.9