Pre_GI: BLASTP Hits

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Query: NC_011094:2115750:2129596 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 2129596, End: 2130183, Length: 588

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002927:3827211:383697238369723837550579Bordetella bronchiseptica RB50, complete genomeputative phage tail protein4e-0754.3
NC_002937:2933000:295113929511392951765627Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative8e-1787
NC_002937:255790:259120259120259746627Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetail protein, putative3e-1788.2
NC_009778:1556222:158586115858611586433573Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-61233
NC_009436:2776410:278999227899922790573582Enterobacter sp. 638, complete genomehypothetical protein8e-60229
NC_008563:2909945:292325629232562923840585Escherichia coli APEC O1, complete genomehypothetical protein1e-59229
NC_009800:2049346:206986320698632070537675Escherichia coli HS, complete genomehypothetical protein2e-1685.5
NC_011750:2928990:294005329400532940637585Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-55213
NC_000913:1188999:120613612061361206720585Escherichia coli K12, complete genomee14 prophage; conserved protein2e-60231
NC_011742:2823000:284056628405662841150585Escherichia coli S88 chromosome, complete genomehypothetical protein1e-59229
NC_007946:2894793:290822929082292908813585Escherichia coli UTI89, complete genomebacteriophage V tail protein1e-59229
AC_000091:1191353:120849012084901209074585Escherichia coli W3110 DNA, complete genomehypothetical protein2e-60231
NC_011740:621408:624496624496625080585Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; e14 prophage1e-60232
NC_011365:592256:631271631271631651381Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome2e-1272.4
NC_000907:1568867:159034015903401590900561Haemophilus influenzae Rd KW20, complete genomehypothetical protein2e-0962.4
NC_012660:4558122:458101345810134581612600Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-1167.8
NC_002947:4362271:438385543838554384499645Pseudomonas putida KT2440, complete genomehypothetical protein3e-1478.2
NC_015733:1398083:139999013999901400634645Pseudomonas putida S16 chromosome, complete genomehypothetical protein6e-1477
NC_011205:2137696:215093821509382151525588Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853tail protein3e-113406
NC_011294:2009388:202263120226312023218588Salmonella enterica subsp. enterica serovar Enteritidis strphage tail protein3e-113406
NC_010102:1779707:180219918021991802786588Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-113405
NC_016810:2027311:204391320439132044500588Salmonella enterica subsp. enterica serovar Typhimurium strputative bacteriophage tail protein3e-113406
NC_016856:2085283:209775020977502098337588Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-113406
NC_017046:2026672:204327420432742043861588Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage tail protein3e-113406
NC_016857:2027311:204391320439132044500588Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tail protein3e-113406
NC_016863:2029340:204594220459422046529588Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-113406
NC_008258:269806:272894272894273478585Shigella flexneri 5 str. 8401, complete genomehypothetical protein6e-61233
NC_007712:1182518:119455111945511195150600Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-73273
NC_007712:4023516:403280940328094033297489Sodalis glossinidius str. 'morsitans', complete genomeputative phage tail protein2e-51201
NC_014228:3282500:331231833123183312899582Xenorhabdus nematophila ATCC 19061, complete genomeputative prophage protein1e-0756.2