Pre_GI: BLASTP Hits

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Query: NC_011094:1923870:1948103 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1948103, End: 1948477, Length: 375

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1902788:192647319264731926853381Salmonella enterica subsp. enterica serovar Typhimurium str. 798cation resistance protein2e-54210
NC_016857:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein2e-54210
NC_016810:1903426:192711019271101927490381Salmonella enterica subsp. enterica serovar Typhimurium strputative cation resistance protein2e-54210
NC_012125:1897611:190154519015451901925381Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-54210
NC_011294:1220526:122446212244621224842381Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-54210
NC_011205:1345511:134945313494531349827375Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-54209
NC_011080:1944226:197516319751631975537375Salmonella enterica subsp. enterica serovar Newport str. SL254,copper resistance protein CopC3e-54209
NC_010102:1137247:114118911411891141563375Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-54209
NC_003197:1945858:196954219695421969916375Salmonella typhimurium LT2, complete genomeputative copper resistance protein3e-54209
NC_016856:1957263:198094719809471981321375Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein3e-54209
NC_016860:1943203:196508319650831965457375Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-54209
NC_016863:1905454:192913819291381929512375Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-54209
NC_011083:1993672:201856320185632018937375Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,copper resistance protein CopC2e-53207
NC_011147:1057259:106120110612011061575375Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-53207
NC_006511:1063249:106719110671911067565375Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cation resistance protein2e-53207
NC_008258:1873805:188908818890881889462375Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-43172
NC_013850:1887556:189148518914851891859375Klebsiella variicola At-22 chromosome, complete genomecopper resistance protein CopC9e-29125
NC_010159:1668795:167639316763931676779387Yersinia pestis Angola, complete genomecopper resistance protein CopC8e-27119
NC_010634:2004653:201292620129262013312387Yersinia pseudotuberculosis PB1/+, complete genomecopper resistance protein CopC8e-27119
NC_015566:2039431:204560720456072045990384Serratia sp. AS12 chromosome, complete genomecopper resistance protein CopC9e-27118
NC_015567:2039443:204561920456192046002384Serratia sp. AS9 chromosome, complete genomecopper resistance protein CopC9e-27118
NC_015061:3111211:313078431307843131167384Rahnella sp. Y9602 chromosome, complete genomecopper resistance protein CopC1e-23108
NC_016818:3114460:313135231313523131735384Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completecopper resistance protein CopC-like protein1e-23108
NC_016816:2073677:207678520767852077159375Pantoea ananatis LMG 5342, complete genomecopper resistance protein CopC1e-21102
NC_012912:2553391:256453625645362564916381Dickeya zeae Ech1591, complete genomecopper resistance protein CopC5e-1889.7
NC_011894:6708970:672760667276066727965360Methylobacterium nodulans ORS 2060, complete genomecopper resistance protein CopC4e-1476.6
NC_010678:900389:932054932054932422369Ralstonia pickettii 12J chromosome 2, complete sequencecopper resistance protein CopC2e-1374.7
NC_015186:2884866:289270228927022893070369Acidiphilium multivorum AIU301, complete genomeputative copper resistance protein3e-1373.6
NC_016589:2824164:285857028585702858944375Burkholderia sp. YI23 chromosome 1, complete sequencecopper resistance protein CopC2e-1167.8
CU928145:3958572:397205939720593972439381Escherichia coli 55989 chromosome, complete genomeCopper resistance protein C precursor2e-1167.4
NC_009778:4188000:421772842177284218108381Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1167.4
NC_011748:3958572:397205939720593972439381Escherichia coli 55989, complete genomeCopper resistance protein C precursor2e-1167.4
NC_008344:2434344:244002124400212440452432Nitrosomonas eutropha C91, complete genomecopper resistance protein CopC5e-0960.1
NC_004757:2213806:223664322366432237065423Nitrosomonas europaea ATCC 19718, complete genomeputative similar to copper export proteins5e-0959.7
NC_008726:3947917:394904739490473949727681Mycobacterium vanbaalenii PYR-1, complete genomecopper resistance protein CopC3e-0857
NC_015690:7518732:7536776753677675384341659Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYcnJ7e-0855.8
NC_010682:1913941:192766019276601928046387Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance protein CopC1e-0755.1
NC_009659:1923925:195478119547811955158378Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C2e-0754.7
NC_009138:1518315:153877615387761539153378Herminiimonas arsenicoxydans, complete genomeCopper resistance protein C precursor CopC3e-0753.9
NC_010170:4800000:484576348457634846149387Bordetella petrii, complete genomeCopper resistance protein C precursor.9e-0752.4
NC_011206:2239109:225020522502052250579375Acidithiobacillus ferrooxidans ATCC 53993, complete genomecopper resistance protein CopC1e-0652
NC_009659:892272:897603897603897989387Janthinobacterium sp. Marseille chromosome, complete genomecopper resistance signal peptide protein C2e-0651.6
NC_014640:1179382:119630811963081196694387Achromobacter xylosoxidans A8 chromosome, complete genomecopper resistance protein C2e-0651.2
NC_009338:2925286:296426129642612964950690Mycobacterium gilvum PYR-GCK chromosome, complete genomecopper resistance protein CopC2e-0651.2
NC_007492:4310828:431348043134804313854375Pseudomonas fluorescens PfO-1, complete genomeCopper resistance protein CopC2e-0651.2
NC_019962:1909103:1947190194719019491781989Natrinema pellirubrum DSM 15624, complete genomeputative copper export protein2e-0651.2
NC_015572:319725:324681324681325052372Methylomonas methanica MC09 chromosome, complete genomecopper resistance protein CopC5e-0649.7