Pre_GI: BLASTP Hits

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Query: NC_011094:1726000:1738817 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1738817, End: 1739926, Length: 1110

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011149:1429523:1436382143638214374911110Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein0735
NC_017046:1709578:1722381172238117234901110Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0733
NC_016863:1711832:1723814172381417249231110Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein0733
NC_016857:1709695:1722498172249817236071110Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein0733
NC_016856:1763640:1775622177562217767311110Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein0733
NC_016810:1709695:1722495172249517236071113Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0733
NC_016860:1752000:1763335176333517644441110Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein0730
NC_011080:1750000:1761997176199717631061110Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein0725
NC_004631:1623511:1636130163613016374281299Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0710
NC_003198:1336894:1343754134375413450521299Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0710
NC_006511:1273162:1280019128001912813171299Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC0707
NC_006905:1766000:1778827177882717798821056Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein0696