Pre_GI: BLASTP Hits

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Query: NC_011094:1726000:1736433 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1736433, End: 1737278, Length: 846

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1711832:172142617214261722271846Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative lipoprotein4e-134477
NC_016860:1752000:176094817609481761793846Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein4e-134477
NC_016857:1709695:172011017201101720955846Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative lipoprotein4e-134477
NC_016856:1763640:177323417732341774079846Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative lipoprotein4e-134477
NC_016810:1709695:172011017201101720955846Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein4e-134477
NC_003197:1753663:176325717632571764102846Salmonella typhimurium LT2, complete genomeputative lipoprotein4e-134477
NC_006905:1766000:177638417763841777229846Salmonella enterica subsp. enterica serovar Choleraesuis strputative serine/threonine protein kinase1e-133476
NC_006511:1273162:128266512826651283510846Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative lipoprotein9e-134476
NC_011147:1267005:127650812765081277353846Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein9e-134476
NC_004631:1623511:163392916339291634774846Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein2e-133474
NC_003198:1336894:134640813464081347253846Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein2e-133474
NC_011149:1429523:143903314390331439878846Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-129460
NC_017046:1709578:171999317199931720793801Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein3e-125447
NC_011080:1750000:175960917596091760205597Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-87320
NC_011740:1595381:160504116050411605910870Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein, putative exported protein3e-25115