Pre_GI: BLASTP Hits

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Query: NC_011094:1726000:1729952 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1729952, End: 1730983, Length: 1032

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1709578:1713424171342417145391116Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0644
NC_016863:1711832:1714941171494117159721032Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein0643
NC_016860:1752000:1754463175446317554941032Salmonella enterica subsp. enterica serovar Typhimurium strMscS family inner membrane protein ynaI0643
NC_016857:1709695:1713625171362517146561032Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative integral membrane protein0643
NC_016856:1763640:1766749176674917677801032Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative integral membrane protein0643
NC_016810:1709695:1713625171362517146561032Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0643
NC_003197:1753663:1756772175677217578031032Salmonella typhimurium LT2, complete genomeputative integral membrane protein0643
NC_011149:1429523:1445327144532714463581032Salmonella enterica subsp. enterica serovar Agona str. SL483,MscS family inner membrane protein YnaI0642
NC_006905:1766000:1769938176993817709691032Salmonella enterica subsp. enterica serovar Choleraesuis strputative integral membrane protein0641
NC_011080:1750000:1753127175312717541581032Salmonella enterica subsp. enterica serovar Newport str. SL254,MscS family inner membrane protein YnaI0639
NC_003198:1336894:1352710135271013537411032Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0638
NC_004631:1623511:1627441162744116284721032Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0638
NC_011147:1267005:1282812128281212838431032Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein0636
NC_006511:1273162:1288969128896912900001032Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein0636
NC_015761:1630000:1649114164911416501451032Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-174611
NC_008258:1873805:1877463187746318784941032Shigella flexneri 5 str. 8401, complete genomehypothetical protein7e-140496
NC_009792:1345500:1360767136076713617981032Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-139495
NC_020418:14965:1735917359183991041Morganella morganii subsp. morganii KT, complete genomeMechanosensitive ion channel3e-110398
NC_008800:2013450:2028284202828420293241041Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative inner membrane protein6e-107387
NC_016514:1142607:1153199115319911542301032Enterobacter cloacae EcWSU1 chromosome, complete genomeMscS family inner membrane protein YnaI2e-98358
NC_012559:2854640:2877981287798128790991119Laribacter hongkongensis HLHK9, complete genomeMscS family inner membrane protein ynaI3e-82305
NC_009482:2109270:2109270210927021103521083Synechococcus sp. RCC307 chromosome, complete genomesmall-conductance mechanosensitive channel protein4e-57221
NC_008820:2422000:2431043243104324321641122Prochlorococcus marinus str. MIT 9303, complete genomesmall mechanosensitive ion channel, MscS family protein1e-56220
NC_005071:2180000:2187636218763621887571122Prochlorococcus marinus str. MIT 9313, complete genomesmall mechanosensitive ion channel, MscS family6e-56218
NC_008319:2471341:2487134248713424881531020Synechococcus sp. CC9311, complete genometransporter, small conductance mechanosensitive ion channel (MscS) family protein8e-49194
NC_015318:290849:3066733066733077671095Hippea maritima DSM 10411 chromosome, complete genomemechanosensitive ion chanel protein MscS2e-45183
NC_011333:1040192:1043492104349210453751884Helicobacter pylori G27 chromosome, complete genomehypothetical protein4e-37155
NC_008593:2457594:2485956248595624871821227Clostridium novyi NT, complete genomeMechanosensitive ion channel family9e-33140
NC_015425:2690448:2720030272003027211721143Clostridium botulinum BKT015925 chromosome, complete genomemechanosensitive channel protein3e-31135
NC_014935:711765:7370107370107382781269Nitratifractor saLSUginis DSM 16511 chromosome, complete genomemscs mechanosensitive ion channel2e-26120
NC_008262:297960:3002783002783014141137Clostridium perfringens SM101, complete genomemechanosensitive ion channel family protein3e-1995.9
NC_019962:2654604:267800626780062678935930Natrinema pellirubrum DSM 15624, complete genomesmall-conductance mechanosensitive channel1e-1790.9
NC_008554:4839116:4858787485878748598751089Syntrophobacter fumaroxidans MPOB, complete genomeMscS Mechanosensitive ion channel4e-1789.4
NC_016816:2782373:2800480280048028016131134Pantoea ananatis LMG 5342, complete genomemechanosensitive ion channel protein MscS5e-1685.5
NC_017192:497950:510259510259511119861Arcobacter sp. L, complete genomemechanosensitive ion channel1e-1584.3
NC_014297:1574238:1593649159364915947641116Halalkalicoccus jeotgali B3 chromosome, complete genomeMscS Mechanosensitive ion channel3e-1479.7
NC_009483:2401209:2417464241746424185431080Geobacter uraniireducens Rf4 chromosome, complete genomemechanosensitive ion channel MscS2e-1377
NC_015761:1181186:1221271122127112224041134Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-1377
NC_007498:357484:385326385326386180855Pelobacter carbinolicus DSM 2380, complete genomesmall-conductance mechanosensitive channel3e-1376.6
NC_014471:1269571:127610312761031276909807Ignisphaera aggregans DSM 17230 chromosome, complete genomeMscS Mechanosensitive ion channel4e-1375.9
NC_012791:721813:7510217510217521091089Variovorax paradoxus S110 chromosome 1, complete genomeMscS Mechanosensitive ion channel5e-1375.5
NC_014507:1373325:1374444137444413754781035Methanoplanus petrolearius DSM 11571 chromosome, complete genomemechanosensitive ion channel MscS5e-1375.5
NC_009092:1305355:132588213258821326706825Shewanella loihica PV-4, complete genomeMscS Mechanosensitive ion channel7e-1375.1
NC_016831:1083871:1106994110699411081271134Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1375.1
NC_003197:1320861:1343990134399013451231134Salmonella typhimurium LT2, complete genomeputative inner membrane protein6e-1375.1
NC_006905:1342474:1375614137561413767471134Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein6e-1375.1
NC_004631:1182883:1211157121115712122901134Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein6e-1375.1
NC_016810:1276340:1300843130084313019761134Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein6e-1375.1
NC_016832:1182496:1210129121012912112621134Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MscS Mechanosensitive ion channel6e-1375.1
NC_017046:1277787:1300916130091613020491134Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein6e-1375.1
NC_016863:1277652:1302155130215513032881134Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein6e-1375.1
NC_016860:1317174:1341676134167613428091134Salmonella enterica subsp. enterica serovar Typhimurium strsmall-conductance mechanosensitive channel6e-1375.1
NC_016857:1276340:1300843130084313019761134Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74mechanosensitive ion channel MscS6e-1375.1
NC_016856:1326503:1353965135396513550981134Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein6e-1375.1
NC_003911:2042389:2043404204340420458362433Silicibacter pomeroyi DSS-3, complete genomemechanosensitive ion channel family protein9e-1374.7
NC_011094:1282385:1310655131065513117881134Salmonella enterica subsp. enterica serovar Schwarzengrund strmechanosensitive ion channel protein MscS2e-1273.6
NC_015144:1333179:133443413344341335351918Weeksella virosa DSM 16922 chromosome, complete genomeMscS Mechanosensitive ion channel2e-1273.2
NC_007517:2165657:2168648216864821697301083Geobacter metallireducens GS-15, complete genomeMscS Mechanosensitive ion channel3e-1273.2
NC_007947:1556437:1562664156266415637311068Methylobacillus flagellatus KT, complete genomeMscS Mechanosensitive ion channel3e-1272.8
NC_014844:1818939:183836918383691839220852Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomemechanosensitive ion channel protein MscS4e-1272.4
NC_005125:4062025:4075744407574440768651122Gloeobacter violaceus PCC 7421, complete genomehypothetical protein6e-1272
NC_009654:4253431:425706542570654257895831Marinomonas sp. MWYL1, complete genomeMscS mechanosensitive ion channel8e-1271.6
NC_015846:790374:791877791877792707831Capnocytophaga canimorsus Cc5 chromosome, complete genomehypothetical protein3e-1169.7
NC_009434:1743696:1762934176293417640731140Pseudomonas stutzeri A1501, complete genomehypothetical protein4e-1169.3
NC_015740:1594376:1614725161472516158641140Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein4e-1169.3
NC_007802:1991211:1993442199344219958322391Jannaschia sp. CCS1, complete genomeMscS Mechanosensitive ion channel8e-1168.2
NC_016940:3600749:362449536244953625313819Saprospira grandis str. Lewin chromosome, complete genomemechanosensitive ion channel protein MscS2e-1067.4
NC_003552:3269000:327155132715513271973423Methanosarcina acetivorans C2A, complete genomehypothetical protein7e-1065.1
NC_014633:339181:3391813391813404401260Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencemechanosensitive ion channel MscS1e-0964.7
NC_009654:3316458:333067833306783331592915Marinomonas sp. MWYL1, complete genomeMscS mechanosensitive ion channel2e-0963.5
NC_012668:83641:108699108699109562864Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-0963.5
NC_014658:701020:722479722479723243765Methanothermus fervidus DSM 2088 chromosome, complete genomemscs mechanosensitive ion channel6e-0962
NC_004459:1:77407740102562517Vibrio vulnificus CMCP6 chromosome I, complete sequenceSmall-conductance mechanosensitive channel8e-0961.6
NC_012997:4906423:490971549097154910701987Teredinibacter turnerae T7901, complete genomeMscS Mechanosensitive ion channel9e-0961.2
NC_007517:2926792:293255229325522933448897Geobacter metallireducens GS-15, complete genomeMscS Mechanosensitive ion channel9e-0961.2
NC_014471:674500:709666709666710502837Ignisphaera aggregans DSM 17230 chromosome, complete genomeMscS Mechanosensitive ion channel1e-0860.8
NC_013171:228356:234376234376235227852Anaerococcus prevotii DSM 20548, complete genomeMscS Mechanosensitive ion channel2e-0860.5
NC_016614:1543333:1545084154508415476602577Vibrio sp. EJY3 chromosome 2, complete sequencepotassium efflux system kefA / Small-conductance mechanosensitive channel2e-0860.5
NC_013316:1:163741637417255882Clostridium difficile R20291, complete genomeputative mechanosensitive ion channel protein2e-0860.5
NC_010321:2319820:234413123441312344982852Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completemechanosensitive ion channel protein MscS2e-0860.1
NC_011528:1769349:1772850177285017749462097Coxiella burnetii CbuK_Q154, complete genomemechanosensitive ion channel2e-0860.1
NC_014964:2301835:232614623261462327000855Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completemechanosensitive ion channel protein MscS2e-0860.1
NC_011989:2262881:2262881226288122653582478Agrobacterium vitis S4 chromosome 1, complete sequencepotassium efflux system KEFA3e-0859.7
NC_008261:225425:249255249255250070816Clostridium perfringens ATCC 13124, complete genomemechanosensitive ion channel family protein3e-0859.7
NC_003366:255480:279879279879280694816Clostridium perfringens str. 13, complete genomehypothetical protein3e-0859.7
NC_009727:357206:3691063691063712022097Coxiella burnetii Dugway 7E9-12, complete genometransporter, small conductance mechanosensitive ion channel (MscS) family protein3e-0859.7
NC_014729:1908086:1922186192218619233431158Halogeometricum borinquense DSM 11551 chromosome, complete genomesmall-conductance mechanosensitive channel3e-0859.3
NC_009089:1:166121661217493882Clostridium difficile 630, complete genomeputative mechanosensitive ion channel protein5e-0858.9
NC_017080:50000:568555685557832978Phycisphaera mikurensis NBRC 102666, complete genomeputative small-conductance mechanosensitive channel5e-0858.9
NC_008262:227354:251679251679252494816Clostridium perfringens SM101, complete genomeMechanosensitive ion channel family5e-0858.9
NC_014355:243543:243543243543244343801Candidatus Nitrospira defluvii, complete genomesmall-conductance mechanosensitive channel1e-0758.2
NC_016745:2280375:2280375228037522815321158Oceanimonas sp. GK1 chromosome, complete genomemechanosensitive ion channel protein MscS1e-0757.8
NC_002971:1545924:1549514154951415516102097Coxiella burnetii RSA 493, complete genomehypothetical protein1e-0757.8
NC_012997:2367400:2386734238673423893282595Teredinibacter turnerae T7901, complete genomeputative transporter1e-0757.4
NC_009428:833701:8347408347408372892550Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomemechanosensitive ion channel MscS1e-0757.4
NC_019940:2731105:2734172273417227356771506Thioflavicoccus mobilis 8321 chromosome, complete genomesmall-conductance mechanosensitive channel2e-0757.4
NC_012438:1600534:1601127160112716021431017Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeMscS Mechanosensitive ion channel4e-0756.2
NC_009328:3504454:353839435383943539305912Geobacillus thermodenitrificans NG80-2 chromosome, complete genomemechanosensitive ion channel protein MscS3e-0756.2
NC_013173:1305916:1308676130867613100131338Desulfomicrobium baculatum DSM 4028, complete genomeMscS Mechanosensitive ion channel4e-0755.8
NC_017271:4410500:4410902441090244133252424Xanthomonas campestris pv. raphani 756C chromosome, completesmall-conductance mechanosensitive channel5e-0755.5
NC_007508:479799:4955294955294979522424Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomesmall-conductance mechanosensitive channel5e-0755.5
NC_009481:2204629:2224156222415622255531398Synechococcus sp. WH 7803 chromosome, complete genomehypothetical protein8e-0755.1
NC_007086:459934:4811584811584836232466Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein7e-0755.1
NC_003902:461808:4790554790554815202466Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein7e-0755.1
NC_007005:4857768:487202348720234872853831Pseudomonas syringae pv. syringae B728a, complete genomeMscS Mechanosensitive ion channel7e-0755.1
NC_010688:449649:4669694669694693592391Xanthomonas campestris pv. campestris, complete genomehypothetical protein7e-0755.1
NC_013406:7092510:710022671002267101128903Paenibacillus sp. Y412MC10 chromosome, complete genomemechanosensitive ion channel protein MscS1e-0654.7
NC_004578:4940000:495636049563604957190831Pseudomonas syringae pv. tomato str. DC3000, complete genomemechanosensitive ion channel family protein1e-0654.3
NC_014365:2037506:205586120558612056727867Desulfarculus baarsii DSM 2075 chromosome, complete genomeMscS Mechanosensitive ion channel2e-0653.5
NC_014532:1191267:1197911119791112014323522Halomonas elongata DSM 2581, complete genomeK05802 potassium efflux system protein KefA3e-0652.8
NC_015318:1151422:1152663115266311544711809Hippea maritima DSM 10411 chromosome, complete genomemechanosensitive ion chanel protein MscS5e-0652.4
NC_013416:1526920:1542313154231315456363324Aggregatibacter actinomycetemcomitans D11S-1, complete genomepotassium efflux system KefA (Protein aefA)4e-0652.4
NC_016513:1859767:1877463187746318807863324Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepotassium efflux protein KefA4e-0652.4
NC_019974:2960872:2984090298409029852321143Natronococcus occultus SP4, complete genomesmall-conductance mechanosensitive channel4e-0652.4
NC_019942:1211535:123989512398951240713819Aciduliprofundum sp. MAR08-339, complete genomesmall-conductance mechanosensitive channel4e-0652.4
NC_019940:2098902:2111003211100321125381536Thioflavicoccus mobilis 8321 chromosome, complete genomesmall-conductance mechanosensitive channel7e-0652
NC_020409:2856481:2896725289672528990282304Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeMscS Mechanosensitive ion channel8e-0651.6
NC_020541:1510782:1533972153397215364462475Rhodanobacter sp. 2APBS1, complete genomesmall-conductance mechanosensitive channel9e-0651.6