Pre_GI: BLASTP Hits

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Query: NC_011094:1726000:1728457 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1728457, End: 1729404, Length: 948

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1709578:171201317120131712960948Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein0648
NC_003197:1753663:175527717552771756224948Salmonella typhimurium LT2, complete genomeputative universal stress protein0648
NC_011149:1429523:144690614469061447853948Salmonella enterica subsp. enterica serovar Agona str. SL483,universal stress protein E0648
NC_006511:1273162:129054812905481291495948Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein0648
NC_011147:1267005:128439112843911285338948Salmonella enterica subsp. enterica serovar Paratyphi A struniversal stress protein UspE0648
NC_016810:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein0648
NC_016856:1763640:176525417652541766201948Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Suniversal stress protein UspE0648
NC_016857:1709695:171213017121301713077948Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74universal stress protein UspE0648
NC_016860:1752000:175296817529681753915948Salmonella enterica subsp. enterica serovar Typhimurium struniversal stress protein UspE0648
NC_016863:1711832:171344617134461714393948Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1universal stress protein UspE0648
NC_004631:1623511:162594616259461626893948Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein0647
NC_003198:1336894:135428913542891355236948Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein0647
NC_011080:1750000:175163217516321752579948Salmonella enterica subsp. enterica serovar Newport str. SL254,universal stress protein E0647
NC_006905:1766000:176844317684431769390948Salmonella enterica subsp. enterica serovar Choleraesuis strputative universal stress protein0645
NC_015761:1630000:164761716476171648564948Salmonella bongori NCTC 12419, complete genomehypothetical protein0643
NC_009792:1345500:136235213623521363302951Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0637
NC_008258:1873805:187470918747091875659951Shigella flexneri 5 str. 8401, complete genomehypothetical protein2e-179628
NC_012214:1974500:201307320130732014023951Erwinia pyrifoliae Ep1/96, complete genomeUniversal stress protein YdaA4e-157553
NC_009052:2512373:255539525553952556327933Shewanella baltica OS155, complete genomeUspA domain protein6e-96350
NC_009092:2282437:230575023057502306682933Shewanella loihica PV-4, complete genomeUspA domain protein7e-96350
NC_012913:772641:782800782800783732933Aggregatibacter aphrophilus NJ8700, complete genomeUspA protein6e-80297
NC_013416:1246880:125933612593361260268933Aggregatibacter actinomycetemcomitans D11S-1, complete genomeUspA protein8e-77287
NC_016513:1568401:158091015809101581842933Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeuniversal stress protein UspE2e-76285
NC_014315:1249071:126177912617791262711933Nitrosococcus watsoni C-113 chromosome, complete genomeUspA domain-containing protein2e-28126
NC_007492:3801237:381641738164173817334918Pseudomonas fluorescens PfO-1, complete genomeUspA6e-24111
NC_016830:3230939:323093932309393231829891Pseudomonas fluorescens F113 chromosome, complete genomeUniversal stress protein family 52e-22106
NC_007492:3801237:381886338188633819786924Pseudomonas fluorescens PfO-1, complete genomeUspA2e-21103
NC_016614:1178000:120977412097741210709936Vibrio sp. EJY3 chromosome 2, complete sequenceuniversal stress protein family 11e-20100
NC_008345:3287000:328852632885263289407882Shewanella frigidimarina NCIMB 400, complete genomehypothetical protein7e-2098.2
NC_007492:3801237:381465238146523815599948Pseudomonas fluorescens PfO-1, complete genomeuniversal stress protein family1e-1790.9
NC_007645:6955479:696362069636206964597978Hahella chejuensis KCTC 2396, complete genomeUniversal stress protein UspA and related nucleotide-binding protein2e-1789.7
NC_009512:2782000:280088428008842801774891Pseudomonas putida F1, complete genomeUspA domain protein3e-1582.8
NC_017986:5797044:579944357994435800345903Pseudomonas putida ND6 chromosome, complete genomeUspA domain-containing protein3e-1582.8