Pre_GI: BLASTP Hits

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Query: NC_011094:1435347:1454181 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1454181, End: 1454930, Length: 750

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:1470794:148971714897171490466750Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-132472
NC_006905:1509093:152796515279651528714750Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaJ1e-132472
NC_011083:1476894:149579214957921496541750Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family1e-132472
NC_011149:1710601:172495817249581725707750Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus lipoprotein, YscJ/HrcJ family3e-132471
NC_004631:1325817:134468313446831345432750Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island lipoprotein1e-131468
NC_003198:1621347:163570416357041636453750Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island lipoprotein1e-131468
NC_006511:1506915:152127215212721522021750Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island lipoprotein5e-131466
NC_011147:1502096:151645315164531517202750Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island lipoprotein5e-131466
NC_011205:1852665:186702218670221867771750Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family5e-131466
NC_011294:1723852:173820917382091738958750Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island lipoprotein5e-131466
NC_011274:1763676:177803317780331778782750Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island lipoprotein3e-130464
NC_003197:1471349:149027714902771491026750Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein4e-130463
NC_016810:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island lipoprotein4e-130463
NC_016856:1481325:150025315002531501002750Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein4e-130463
NC_016857:1428201:144712914471291447878750Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein4e-130463
NC_016863:1429516:144844414484441449193750Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein4e-130463
NC_016860:1469066:148796414879641488713750Salmonella enterica subsp. enterica serovar Typhimurium strneedle complex inner membrane lipoprotein7e-130462
NC_012125:2360815:237517223751722375861690Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island lipoprotein7e-121432
NC_010102:1616530:163088716308871631576690Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-121432
NC_016832:1324820:134371613437161344405690Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secretion system apparatus lipoprotein ssaJ6e-120429
NC_016831:1236786:125571012557101256399690Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island lipoprotein2e-118424
NC_017046:1428272:144726014472601447949690Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island lipoprotein5e-118423
NC_010067:1507823:152575715257571526506750Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-111401
NC_012779:916000:931839931839932570732Edwardsiella ictaluri 93-146, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family, putative1e-45183
NC_005085:2774370:278815527881552788880726Chromobacterium violaceum ATCC 12472, complete genometype III secretion system apparatus lipoprotein3e-44178
NC_014012:2565329:257223625722362572967732Shewanella violacea DSS12, complete genometype III secretion system apparatus lipoprotein1e-42173
AP010958:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscJ5e-31134
NC_013353:3669500:370024737002473700819573Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscJ5e-31134
NC_013361:5319497:534306153430615343633573Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscJ5e-31134
NC_002695:4584177:461034346103434610915573Escherichia coli O157:H7 str. Sakai, complete genomeEscJ3e-30132
NC_002655:4653160:467932646793264679898573Escherichia coli O157:H7 EDL933, complete genomeescJ3e-30132
NC_011353:4688000:471344747134474714019573Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family3e-30132
NC_011601:4096427:412410841241084124680573Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscJ3e-30132
NC_013008:4643825:466948846694884670060573Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system factor3e-30132
NC_013364:3701895:374174937417493742321573Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscJ3e-30132
NC_013941:4470932:449784744978474498419573Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeEscJ3e-30132
NC_017249:8283701:828971882897188290581864Bradyrhizobium japonicum USDA 6, complete genomeRhcJ protein3e-27122
NC_007645:3343815:334381533438153344612798Hahella chejuensis KCTC 2396, complete genomeType III secretory pathway, lipoprotein EscJ6e-27120
NC_010688:3487000:350844835084483509212765Xanthomonas campestris pv. campestris, complete genomeHrcJ protein1e-24113
NC_002678:5139557:515537151553715156210840Mesorhizobium loti MAFF303099, complete genomeNODULATION PROTEIN NOLT4e-23108
NC_003919:457482:479630479630480391762Xanthomonas axonopodis pv. citri str. 306, complete genomeHrcJ protein3e-22105
NC_009439:20545:275242752428342819Pseudomonas mendocina ymp, complete genomeYscJ/HrcJ family type III secretion apparatus lipoprotein1e-21103
NC_012660:819381:827789827789828604816Pseudomonas fluorescens SBW25 chromosome, complete genomeputative type III secretion protein2e-2099.4
NC_013008:3761467:377832737783273779061735Escherichia coli O157:H7 str. TW14359 chromosome, complete genomelipoprotein of type III secretion apparatus4e-1995.1
NC_011353:3805819:382360138236013824335735Escherichia coli O157:H7 str. EC4115 chromosome, complete genometype III secretion apparatus lipoprotein EprK4e-1995.1
NC_002655:3769643:378650437865043787238735Escherichia coli O157:H7 EDL933, complete genomeputative lipoprotein of type III secretion apparatus4e-1995.1
NC_002695:3702344:371920437192043719938735Escherichia coli O157:H7 str. Sakai, complete genomeEprK4e-1995.1
NC_011751:3285646:330342933034293304163735Escherichia coli UMN026 chromosome, complete genomeputative type III secretion system lipoprotein EprK5e-1994.7
NC_011147:2814664:282507828250782825836759Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island 1 effector protein2e-1892.8
NC_011094:2913500:292220229222022922960759Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus lipoprotein, YscJ/HrcJ family protein2e-1892.8
NC_010102:2967464:297797829779782978736759Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1892.8
NC_006905:2960260:296852329685232969281759Salmonella enterica subsp. enterica serovar Choleraesuis strcell invasion protein; lipoprotein, may link inner and outer membranes2e-1892.8
NC_011083:2980356:298951029895102990268759Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1892.8
NC_006511:2819128:282954228295422830300759Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpathogenicity 1 island effector protein2e-1892.8
NC_011080:2982346:299150029915002992258759Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1892.8
NC_003197:3005842:301499630149963015754759Salmonella typhimurium LT2, complete genomeneedle complex inner membrane lipoprotein2e-1892.8
NC_011205:3050235:305938730593873060145759Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1892.8
NC_011274:2881306:289046028904602891218759Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity 1 island effector protein2e-1892.8
NC_011294:2890500:289965528996552900413759Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity 1 island effector protein2e-1892.8
NC_017046:3027161:303631230363123037070759Salmonella enterica subsp. enterica serovar Typhimurium str. 798type III secretion system apparatus2e-1892.8
NC_016863:2974333:298348629834862984244759Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1needle complex inner membrane lipoprotein2e-1892.8
NC_016860:3029272:303842630384263039184759Salmonella enterica subsp. enterica serovar Typhimurium strpathogenicity 1 island effector protein2e-1892.8
NC_016857:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74needle complex inner membrane lipoprotein2e-1892.8
NC_016856:3026426:303523330352333035991759Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sneedle complex inner membrane lipoprotein2e-1892.8
NC_016831:2867766:287691928769192877677759Salmonella enterica subsp. enterica serovar Gallinarum/pullorumpathogenicity 1 island effector protein2e-1892.8
NC_016810:3028421:303757230375723038330759Salmonella enterica subsp. enterica serovar Typhimurium strtype III secretion system apparatus2e-1892.8
NC_012125:2938519:294890729489072949665759Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity 1 island effector protein2e-1892.8
NC_013361:3867558:388509638850963885830735Escherichia coli O26:H11 str. 11368 chromosome, complete genometype III secretion system lipoprotein EprK3e-1892.4
NC_011741:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomeputative Type III secretion system lipoprotein EprK3e-1892.4
NC_011415:3217796:323533432353343236068735Escherichia coli SE11 chromosome, complete genomeputative lipoprotein of type III secretion apparatus3e-1892.4
NC_011748:3196173:321371132137113214445735Escherichia coli 55989, complete genomePutative Type III secretion system lipoprotein EprK3e-1892.4
NC_009801:3175714:319325131932513193985735Escherichia coli E24377A, complete genometype III secretion apparatus lipoprotein EprK3e-1892.4
CU928160:3030324:304786230478623048596735Escherichia coli IAI1 chromosome, complete genomePutative Type III secretion system lipoprotein EprK3e-1892.4
CU928145:3196173:321371132137113214445735Escherichia coli 55989 chromosome, complete genomePutative Type III secretion system lipoprotein EprK3e-1892.4
NC_013364:3552284:356982835698283570562735Escherichia coli O111:H- str. 11128, complete genometype III secretion system lipoprotein EprK3e-1892.4
NC_004631:2842453:285286728528672853625759Salmonella enterica subsp. enterica serovar Typhi Ty2, completepathogenicity 1 island effector protein3e-1892.4
NC_015761:2726000:273522527352252735983759Salmonella bongori NCTC 12419, complete genomepathogenicity 1 island effector protein2e-1892.4
NC_013971:1660144:167238916723891673168780Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system lipoprotein2e-1892.4
NC_013961:1622616:163486116348611635640780Erwinia amylovora, complete genomeLipoprotein PrgK precursor2e-1892.4
NC_011149:2912219:292352429235242924282759Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus lipoprotein, YscJ/HrcJ family2e-1892.4
NC_010067:84093:987409874099498759Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1892.4
NC_016832:2829767:284016628401662840924759Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-1892.4
NC_003198:2856596:286701028670102867768759Salmonella enterica subsp. enterica serovar Typhi str. CT18,pathogenicity 1 island effector protein3e-1892.4
NC_010694:2138000:216820521682052168984780Erwinia tasmaniensis, complete genomeType III secretion system6e-1891.3
CP002516:903241:918685918685919419735Escherichia coli KO11, complete genome1e-1790.1
CP002185:3167738:318665731866573187391735Escherichia coli W, complete genome1e-1790.1
NC_012214:2221702:225552622555262256287762Erwinia pyrifoliae Ep1/96, complete genomeType III secretion system8e-1787.4
NC_013961:851044:859553859553860320768Erwinia amylovora, complete genomeLipoprotein PrgK precursor1e-1686.7
NC_020064:4125500:414224441422444143014771Serratia marcescens FGI94, complete genometype III secretion apparatus lipoprotein, YscJ/HrcJ family1e-1686.7
NC_013722:1689125:171059617105961711483888Xanthomonas albilineans, complete genomeprobable xanthomonas secretion apparatus protein6e-1581.3
NC_014366:2513352:252556525255652526299735Gamma proteobacterium HdN1, complete genomeType III secretion pathway protein6e-1374.7
NC_010468:906957:9224059224059239151511Escherichia coli ATCC 8739, complete genome1e-1273.2
NC_013353:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009, complete genome7e-0960.8
AP010958:3474077:349161434916143492150537Escherichia coli O103:H2 str. 12009 DNA, complete genome7e-0960.8
NC_020209:47504:104511104511104900390Pseudomonas poae RE*1-1-14, complete genometype III secretion apparatus lipoprotein RscJ4e-0858.5
NC_009800:2995958:301629330162933016619327Escherichia coli HS, complete genome4e-0858.5