Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1313180 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1313180, End: 1314049, Length: 870

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1277787:130344113034411304310870Salmonella enterica subsp. enterica serovar Typhimurium str. 798aminoglycoside-resistance protein2e-167587
NC_016857:1276340:130336813033681304237870Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74aminoglycoside resistance protein2e-167587
NC_016831:1083871:110951911095191110388870Salmonella enterica subsp. enterica serovar Gallinarum/pullorumaminoglycoside-resistance protein7e-165579
NC_016863:1277652:130476113047611305549789Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1aminoglycoside resistance protein2e-149528
NC_016856:1326503:135657113565711357359789Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Saminoglycoside resistance protein2e-149528
NC_016810:1276340:130344913034491304237789Salmonella enterica subsp. enterica serovar Typhimurium straminoglycoside-resistance protein2e-149528
NC_003197:1320861:134659613465961347384789Salmonella typhimurium LT2, complete genomeaminoglycoside adenyltransferase2e-149528
NC_016832:1182496:121273512127351213523789Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Streptomycin 3''-adenylyltransferase8e-147519
NC_004631:1182883:121376312137631214551789Salmonella enterica subsp. enterica serovar Typhi Ty2, completeaminoglycoside-resistance protein8e-147519
NC_015761:1181186:122391612239161224704789Salmonella bongori NCTC 12419, complete genomeaminoglycoside-resistance protein3e-124444
NC_006856:26438:421284212842931804Salmonella enterica subsp. enterica serovar Choleraesuis strstreptomycin 3''-adenyl transferase1e-57223
NC_009140:121107:1258881258881268951008Salmonella enterica enterica sv Newport str. SL254, completeaminoglycoside resistance protein4e-57221
NC_009349:78000:9150491504925111008Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeaminoglycoside resistance protein4e-57221
NC_014836:2919508:106731067311611939Desulfurispirillum indicum S5 chromosome, complete genomeadenylyltransferase3e-56219
NC_016860:4055117:407496140749614075752792Salmonella enterica subsp. enterica serovar Typhimurium straminoglycoside resistance protein2e-56219
NC_017328:1075535:110918411091841109975792Shigella flexneri 2002017 chromosome, complete genomeStreptomycin adenyltransferase2e-56219
NC_010410:3606826:365606936560693656899831Acinetobacter baumannii AYE, complete genomeAminoglycoside 3'-(9)-O-adenylyltransferase AADA11e-56219
NC_006856:26438:397233972340514792Salmonella enterica subsp. enterica serovar Choleraesuis straminoglycoside adenyltransferase1e-56219
NC_014924:3065430:307672030767203077511792Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome3''-adenylyltransferase1e-56219
NC_010410:3606826:362149236214923622283792Acinetobacter baumannii AYE, complete genomeAminoglycoside 3'-(9)-O-adenylyltransferase AADA11e-56219
NC_009838:81913:966209662097411792Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceaminoglycoside resistance protein1e-56219
NC_011586:268927:314309314309315100792Acinetobacter baumannii AB0057 chromosome, complete genomeaminoglycoside resistance protein1e-56219
NC_017171:1331794:134472313447231345514792Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomestreptomycin/spectinomycin adenyltransferase1e-56219
NC_017387:247462:266824266824267615792Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeaminoglycoside 3'-adenyltransferase1e-56219
NC_017387:247462:277658277658278449792Acinetobacter baumannii TCDC-AB0715 chromosome, complete genomeaminoglycoside 3'-adenyltransferase1e-56219
NC_017328:3935185:394814339481433948931789Shigella flexneri 2002017 chromosome, complete genomeStreptomycin 3''-adenylyltransferase5e-56218
NC_007384:4095016:411045841104584111246789Shigella sonnei Ss046, complete genomeaminoglycoside-resistance protein5e-56218
NC_008095:2011748:201305720130572013875819Myxococcus xanthus DK 1622, complete genomeputative aminoglycoside-3'-adenylyltransferase4e-54211
NC_011751:4992500:499488249948824995670789Escherichia coli UMN026 chromosome, complete genomeaminoglycoside resistance protein2e-52206
NC_011837:2605409:261974426197442620562819Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-44178
NC_009706:2673906:268824126882412689059819Clostridium kluyveri DSM 555 chromosome, complete genomestreptomycin 3''-adenylyltransferase4e-44178
NC_007907:4956500:496937149693714970153783Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-40165
NC_011830:1037520:104963110496311050413783Desulfitobacterium hafniense DCB-2, complete genome3''-adenylyltransferase7e-39160
NC_010520:3674883:367988136798813680666786Clostridium botulinum A3 str. Loch Maree, complete genome1e-38160
NC_003888:4750489:476970447697044770477774Streptomyces coelicolor A3(2), complete genomenucleotidyltransferase3e-35149
NC_017162:1228723:1245025124502512460561032Acinetobacter baumannii 1656-2 chromosome, complete genometransposase2e-23110
NC_017162:1228723:124817012481701248337168Acinetobacter baumannii 1656-2 chromosome, complete genomeStreptomycin/spectinomycin adenyltransferase2e-0859.7