Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1311982 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1311982, End: 1312308, Length: 327

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008541:1931266:193766919376691938088420Arthrobacter sp. FB24 chromosome 1, complete sequenceprotein of unknown function DUF3262e-0650.8
NC_014639:1358597:137644913764491376766318Bacillus atrophaeus 1942 chromosome, complete genomeferredoxin2e-0651.6
CP002207:1358597:137644913764491376766318Bacillus atrophaeus 1942, complete genomeferredoxin2e-0651.6
NC_017297:1700000:170138717013871701776390Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein1e-0652
NC_009699:1698951:170125717012571701604348Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein1e-1168.6
NC_020051:31850:376823768238038357Gloeocapsa sp. PCC 7428 plasmid pGLO7428.02, complete sequencehypothetical protein6e-1372.8
NC_007645:2842957:284577328457732846102330Hahella chejuensis KCTC 2396, complete genomeFerredoxin4e-1683.2
NC_012969:1442147:145699914569991457409411Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein3e-0650.4
NC_012803:1980955:199173019917301992140411Micrococcus luteus NCTC 2665, complete genomeprotein of unknown function (DUF326)3e-0753.9
NC_017955:1584269:159445615944561594863408Modestobacter marinus, complete genomehypothetical protein2e-0754.3
NC_016048:1694631:170695717069571707301345Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein6e-1372.8
NC_020829:940692:965104965104965433330Pseudomonas denitrificans ATCC 13867, complete genomeferredoxin3e-1890.1
NC_010682:1913941:193367719336771934003327Ralstonia pickettii 12J chromosome 1, complete sequenceprotein of unknown function DUF3264e-1683.6
NC_015761:1181186:122259512225951222921327Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-42169
NC_006905:1342474:137694113769411377267327Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein5e-44176
NC_016831:1083871:110832111083211108647327Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-44176
NC_004631:1182883:121248412124841212810327Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-43174
NC_016810:1276340:130217013021701302496327Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-43174
NC_016860:1317174:134300313430031343329327Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-44176
NC_016856:1326503:135529213552921355618327Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein5e-44176
NC_017046:1277787:130224313022431302569327Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-43174
NC_016857:1276340:130217013021701302496327Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein1e-43174
NC_016863:1277652:130348213034821303808327Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein5e-44176
NC_003197:1320861:134531713453171345643327Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein5e-44176
NC_003888:3602753:362444936244493624859411Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-0858.2
NC_014831:1906691:191464519146451914989345Thermaerobacter marianensis DSM 12885 chromosome, complete genomeferredoxin3e-1580.5