Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1304792 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1304792, End: 1305106, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1277652:129629212962921296606315Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane lipoprotein2e-53207
NC_003197:1320861:133812713381271338441315Salmonella typhimurium LT2, complete genomeputative outer membrane lipoprotein2e-53207
NC_011149:1870931:187502318750231875337315Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-53207
NC_004631:1182883:120527212052721205586315Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative lipoprotein2e-53207
NC_006511:1654959:166042616604261660740315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative lipoprotein2e-53207
NC_003198:1771432:177554617755461775860315Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative lipoprotein2e-53207
NC_010102:1779707:178379917837991784113315Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-53207
NC_011147:1650142:165560916556091655923315Salmonella enterica subsp. enterica serovar Paratyphi A strlipoprotein2e-53207
NC_011205:2024458:202855020285502028864315Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-53207
NC_011274:1928939:193303119330311933345315Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lipoprotein2e-53207
NC_011294:1896168:190026019002601900574315Salmonella enterica subsp. enterica serovar Enteritidis strlipoprotein2e-53207
NC_016860:1317174:133581313358131336127315Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-53207
NC_016857:1276340:129498012949801295294315Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative lipoprotein2e-53207
NC_016856:1326503:134810213481021348416315Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane lipoprotein2e-53207
NC_016832:1182496:120424412042441204558315Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-53207
NC_016831:1083871:110113111011311101445315Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative lipoprotein2e-53207
NC_016810:1276340:129498012949801295294315Salmonella enterica subsp. enterica serovar Typhimurium strputative lipoprotein2e-53207
NC_012125:2531817:253590925359092536223315Salmonella enterica subsp. enterica serovar Paratyphi C strainlipoprotein2e-53207
NC_006905:1342474:136974513697451370059315Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane lipoprotein1e-52204
NC_015761:1181186:121545812154581215772315Salmonella bongori NCTC 12419, complete genomelipoprotein1e-51201
NC_010067:1655815:165994216599421660256315Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-51199
NC_017046:1277787:129505312950531295196144Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein8e-2095.5
NC_007484:3071329:307510130751013075409309Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein3e-0960.5