Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1296121 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1296121, End: 1296360, Length: 240

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009792:3665369:369258336925833692891309Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-36149
NC_020181:5217000:524473352447335244972240Enterobacter aerogenes EA1509E, complete genomeVirulence protein MsgA7e-33139
NC_014121:2745097:275090027509002751139240Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeVirulence protein msgA2e-31134
NC_010694:2189652:219526521952652195510246Erwinia tasmaniensis, complete genomeVirulence protein MsgA7e-25112
NC_016816:1912366:192450919245091924748240Pantoea ananatis LMG 5342, complete genomevirulence protein MsgA1e-25115
NC_014837:2586870:259606325960632596302240Pantoea sp. At-9b chromosome, complete genomeDinI family protein3e-25113
NC_014562:1844268:184982918498291850068240Pantoea vagans C9-1 chromosome, complete genomeVirulence protein msgA2e-25114
NC_015761:1181186:120462912046291204868240Salmonella bongori NCTC 12419, complete genomevirulence protein4e-40162
NC_010067:1655815:166869016686901669040351Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-38158
NC_011149:1870931:188375818837581883997240Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein2e-40164
NC_006905:1342474:136110113611011361340240Salmonella enterica subsp. enterica serovar Choleraesuis strMacrophage survival gene; reduced mouse virulence2e-40164
NC_011205:2024458:203727320372732037512240Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-40164
NC_011205:1107998:112200211220021122193192Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gifsy-2 prophage MsgA9e-22102
NC_011294:2334979:233910923391092339312204Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-0754.7
NC_011294:1896168:190898319089831909222240Salmonella enterica subsp. enterica serovar Enteritidis strvirulence protein MsgA2e-40164
NC_011294:1006630:102137510213751021566192Salmonella enterica subsp. enterica serovar Enteritidis strprophage encoded virulence protein3e-22103
NC_011274:1928939:194174419417441941983240Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91virulence protein MsgA2e-40164
NC_011274:2325840:232996923299692330172204Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-0754.7
NC_016831:1083871:109250010925001092739240Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative virulence protein (MsgA)2e-40164
NC_016831:687549:704194704194704430237Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-0857
NC_011083:1323827:133451013345101334749240Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-40163
NC_011080:2342672:234676823467682346989222Salmonella enterica subsp. enterica serovar Newport str. SL254,putative homolog of virulence protein MsgA3e-0753.9
NC_011147:1650142:166209916620991662338240Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence protein2e-40164
NC_011147:682897:699991699991700194204Salmonella enterica subsp. enterica serovar Paratyphi A strvirulence protein MsgA-like protein6e-0753.1
NC_006511:1654959:166691616669161667155240Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative virulence protein2e-40164
NC_006511:682863:700052700052700255204Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChomolog of virulence protein msgA6e-0753.1
NC_010102:1829357:183808118380811838350270Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein7e-23105
NC_010102:1779707:179252017925201792759240Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-40163
NC_010102:683444:700606700606700794189Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0651.6
NC_012125:2531817:254462625446262544871246Salmonella enterica subsp. enterica serovar Paratyphi C strainvirulence protein1e-40164
NC_011094:2348491:235070223507022350905204Salmonella enterica subsp. enterica serovar Schwarzengrund strMsgA-like virulence protein1e-0755.1
NC_011094:688626:695659695659695784126Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-1167.4
NC_003198:1771432:178427617842761784515240Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative virulence protein2e-40164
NC_016832:1182496:119558911955891195828240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-40162
NC_004631:1182883:119661711966171196856240Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative virulence protein6e-40162
NC_016810:1276340:128631912863191286558240Salmonella enterica subsp. enterica serovar Typhimurium strputative virulence protein (MsgA)2e-40164
NC_016860:2323017:232703523270352327325291Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein7e-2095.9
NC_016810:2325190:232920823292082329498291Salmonella enterica subsp. enterica serovar Typhimurium strputative SsrB-regulated factor7e-2095.9
NC_016860:1317174:132715313271531327392240Salmonella enterica subsp. enterica serovar Typhimurium strputative virulence protein2e-40164
NC_016856:1326503:133944113394411339680240Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Smacrophage survival protein2e-40164
NC_016856:2379027:238304523830452383335291Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein7e-2095.9
NC_017046:1277787:128639212863921286637246Salmonella enterica subsp. enterica serovar Typhimurium str. 798virulence protein (MsgA)1e-40164
NC_016857:1276340:128631912863191286564246Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative virulence protein1e-40164
NC_016857:2325190:232920823292082329498291Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein7e-2095.9
NC_016863:1277652:128763112876311287870240Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1macrophage survival protein2e-40164
NC_016863:2324293:233123723312372331527291Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein7e-2095.9
NC_003197:2327474:233149223314922331782291Salmonella typhimurium LT2, complete genomevirulence protein7e-2095.9
NC_003197:1320861:132946613294661329705240Salmonella typhimurium LT2, complete genomemacrophage survival protein2e-40164
NC_020211:2012480:204033420403342040573240Serratia marcescens WW4, complete genomeDNA damage-inducible protein I5e-0753.1
NC_015566:3622385:362825636282563628498243Serratia sp. AS12 chromosome, complete genomeDinI family protein7e-27119
NC_010159:409500:415927415927416172246Yersinia pestis Angola, complete genomeDNA-damage-inducible protein I1e-0651.6
NC_008150:2173708:217506721750672175312246Yersinia pestis Antiqua, complete genomeDNA-damage-inducible protein I1e-0651.6
NC_005810:2508671:251447525144752514720246Yersinia pestis biovar Microtus str. 91001, complete genomeDNA damage-inducible protein I1e-0651.6
NC_004088:1909880:192842819284281928673246Yersinia pestis KIM, complete genomedamage-inducible protein I8e-0752.8