Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1292378 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1292378, End: 1293106, Length: 729

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1650142:166535316653531666081729Salmonella enterica subsp. enterica serovar Paratyphi A strpertussis-like toxin subunit3e-129461
NC_006511:1654959:167017016701701670898729Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pertussis-like toxin subunit3e-129461
NC_016832:1182496:119172111917211192575855Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Pertussis toxin, subunit 1 subfamily9e-129459
NC_003198:1771432:178752917875291788257729Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pertussis-like toxin subunit1e-128459
NC_004631:1182883:119287511928751193603729Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pertussis-like toxin subunit1e-128459
NC_015761:1181186:119241311924131193144732Salmonella bongori NCTC 12419, complete genomepertussis-like toxin subunit3e-107387
NC_010067:2304313:231606023160602316791732Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-102371
NC_015761:1017301:102358510235851024331747Salmonella bongori NCTC 12419, complete genomepertussis toxin s1 subunit6e-68257