Pre_GI: BLASTP Hits

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Query: NC_011094:1282385:1284557 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1284557, End: 1285204, Length: 648

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:2125403:212755621275562128182627Serratia sp. AS12 chromosome, complete genomeHigh frequency lysogenization protein hflD2e-75281
NC_015942:1824847:182903818290381829706669Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHigh frequency lysogenization protein hflD5e-1787.8
NC_015567:2125415:212756821275682128194627Serratia sp. AS9 chromosome, complete genomeHigh frequency lysogenization protein hflD2e-75281
NC_012560:2906459:292150229215022922125624Azotobacter vinelandii DJ, complete genomehypothetical protein3e-26118
NC_016810:1276340:127771412777141278361648Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-109393
NC_016831:1083871:108387110838711084518648Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein7e-109392
NC_011149:1870931:189264018926401893281642Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-108390
NC_009792:1739970:174370817437081744355648Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-105382
NC_013361:1634226:163422616342261634867642Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein1e-103375
NC_012759:1093764:109513810951381095779642Escherichia coli BW2952 chromosome, complete genomehypothetical protein1e-103375
NC_009801:1296488:129786212978621298503642Escherichia coli E24377A, complete genomehypothetical protein1e-103375
NC_011742:1177946:117794611779461178587642Escherichia coli S88 chromosome, complete genomehypothetical protein6e-103373
NC_014121:2514544:254916725491672549796630Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-100365
NC_021150:2906471:292151429215142922137624Azotobacter vinelandii CA6, complete genomehypothetical protein3e-26118
NC_003197:1320861:132086113208611321508648Salmonella typhimurium LT2, complete genomehypothetical protein4e-109393
NC_011083:1323827:132520113252011325842642Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-108390
NC_015761:1181186:118118611811861181827642Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-107386
NC_012947:2566754:258638725863872587028642Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-103375
NC_009800:1254409:125440912544091255050642Escherichia coli HS, complete genomehypothetical protein1e-103375
NC_011748:1300863:130223713022371302878642Escherichia coli 55989, complete genomehypothetical protein1e-103375
NC_010658:1193225:119689811968981197539642Shigella boydii CDC 3083-94, complete genomehypothetical protein1e-102372
NC_007712:1791766:179315617931561793785630Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-71267
NC_010995:2855595:285677128567712857394624Cellvibrio japonicus Ueda107, complete genomehypothetical protein9e-34143
NC_016863:1277652:127902612790261279673648Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-109393
NC_011274:1928939:194996219499621950609648Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-109393
NC_011080:1321268:132264213226421323283642Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein5e-108390
NC_011205:2024458:204549920454992046140642Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-107389
NC_016902:2786000:280515828051582805799642Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-103375
NC_012967:1205985:120735912073591208000642Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein1e-103375
NC_011415:1273551:127492512749251275566642Escherichia coli SE11 chromosome, complete genomehypothetical protein1e-103375
NC_000913:1188999:119121311912131191854642Escherichia coli K12, complete genomehypothetical protein1e-103375
NC_010498:1995500:201387920138792014520642Escherichia coli SMS-3-5, complete genomehypothetical protein6e-103373
NC_020418:2910593:292754729275472928176630Morganella morganii subsp. morganii KT, complete genomeHypothetical protein2e-62238
NC_017046:1277787:127778712777871278434648Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-109393
NC_011294:1896168:191719519171951917842648Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-109393
NC_016860:1317174:131854813185481319189642Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-108390
NC_012125:2531817:255283425528342553481648Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-107389
NC_013716:1298932:132650213265021327143642Citrobacter rodentium ICC168, complete genomehypothetical protein1e-103375
NC_011741:1232510:123388412338841234525642Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-103375
NC_011751:1405381:140675514067551407396642Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-103375
NC_011601:1315746:131712013171201317761642Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein6e-103373
NC_012731:2083650:208502420850242085665642Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein1e-96352
NC_013353:1339263:134063713406371341278642Escherichia coli O103:H2 str. 12009, complete genomelysogenization regulator1e-103375
AP010958:1339263:134063713406371341278642Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted lysogenization regulator1e-103375
CP002185:1298675:130004913000491300690642Escherichia coli W, complete genomepredicted lysogenization regulator1e-103375
NC_010473:1245284:124665812466581247299642Escherichia coli str. K-12 substr. DH10B, complete genomepredicted lysogenization regulator1e-103375
AC_000091:1191353:119356711935671194208642Escherichia coli W3110 DNA, complete genomepredicted lysogenization regulator1e-103375
NC_012880:2425330:244560624456062446235630Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF4898e-68256
NC_009832:2211154:221541422154142216040627Serratia proteamaculans 568, complete genomeprotein of unknown function DUF4891e-76285
NC_012912:2216749:222080822208082221440633Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF4893e-70264
NC_010468:2699000:271853727185372719178642Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF4891e-103375
NC_013850:3340882:336634233663423366983642Klebsiella variicola At-22 chromosome, complete genomeprotein of unknown function DUF4891e-96352
NC_013166:1149760:116769411676941168308615Kangiella koreensis DSM 16069, complete genomeprotein of unknown function DUF4894e-22104
CP002516:2786000:280515828051582805799642Escherichia coli KO11, complete genomeprotein of unknown function DUF4891e-103375
NC_016857:1276340:127771412777141278361648Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative High frequency lysogenization protein hflD4e-109393
CU928160:1232510:123388412338841234525642Escherichia coli IAI1 chromosome, complete genomeputative inner membrane protein; lambda lysogenization regulator, UPF0274 family1e-103375
CU928145:1300863:130223713022371302878642Escherichia coli 55989 chromosome, complete genomeputative inner membrane protein; lambda lysogenization regulator, UPF0274 family1e-103375
NC_013364:1477248:150203915020391502680642Escherichia coli O111:H- str. 11128, complete genomeputative lysogenization regulator1e-103375
NC_016612:3803130:380450438045043805145642Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative lysogenization regulator4e-96350
NC_020064:1962172:196594019659401966566627Serratia marcescens FGI94, complete genomeuncharacterized protein involved in purine metabolism1e-77288
NC_013282:1804909:180490918049091805538630Cronobacter turicensis, complete genomeUPF0274 protein ESA_022145e-86317
NC_014562:983398:984813984813985454642Pantoea vagans C9-1 chromosome, complete genomeUPF0274 protein ycfC3e-77287