Pre_GI: BLASTP Hits

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Query: NC_011094:1166271:1187635 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1187635, End: 1188030, Length: 396

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:1164176:118554111855411185936396Salmonella enterica subsp. enterica serovar Typhimurium str. 798assembly/transport component in curli production1e-72271
NC_011083:1216500:123367712336771234072396Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,curli production assembly/transport component CsgE1e-72271
NC_003197:1207597:122932812293281229723396Salmonella typhimurium LT2, complete genomecurli production assembly/transport component1e-72271
NC_006905:1186895:120941312094131209808396Salmonella enterica subsp. enterica serovar Choleraesuis strcurli production assembly/transport component, 2nd curli operon1e-72271
NC_003198:1117687:113960311396031139998396Salmonella enterica subsp. enterica serovar Typhi str. CT18,assembly/transport component in curli production1e-72271
NC_011080:1209935:123111512311151231510396Salmonella enterica subsp. enterica serovar Newport str. SL254,curli production assembly/transport component CsgE1e-72271
NC_011147:1763681:176433617643361764731396Salmonella enterica subsp. enterica serovar Paratyphi A strcurli assembly protein CsgE1e-72271
NC_016831:947281:992360992360992755396Salmonella enterica subsp. enterica serovar Gallinarum/pullorumassembly/transport component in curli production1e-72271
NC_016832:1838220:183822018382201838615396Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Curli production assembly/transport component csgE1e-72271
NC_016860:1205282:122701412270141227409396Salmonella enterica subsp. enterica serovar Typhimurium strcurli assembly protein CsgE1e-72271
NC_016863:1165232:118678111867811187176396Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1curli assembly protein CsgE1e-72271
NC_000913:1087062:110137511013751101764390Escherichia coli K12, complete genomepredicted transport protein6e-64242
AC_000091:1083798:110239311023931102782390Escherichia coli W3110 DNA, complete genomepredicted transport protein6e-64242
NC_004337:1065609:107831310783131078702390Shigella flexneri 2a str. 301, complete genomeCurli production assembly/transport component CsgE precursor5e-63239
NC_008258:1076922:109635510963551096744390Shigella flexneri 5 str. 8401, complete genomeCurli production assembly/transport component csgE precursor5e-63239
NC_013716:1178383:119953911995391199928390Citrobacter rodentium ICC168, complete genomecurli production assembly/transport component4e-61233
NC_015968:1709680:171743217174321717821390Enterobacter asburiae LF7a chromosome, complete genomeCurli assembly protein CsgE7e-51198
NC_014121:2629075:264258826425882642977390Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecurli assembly protein CsgE2e-49193
NC_018868:1960542:201294120129412013357417Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomecurli assembly protein CsgE1e-1272