Pre_GI: BLASTP Hits

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Query: NC_011094:1050700:1073501 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1073501, End: 1074184, Length: 684

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:1994392:199998219999822000671690Pseudomonas aeruginosa PA7 chromosome, complete genomecytidylate kinase8e-61233
NC_008027:1559083:156657215665721567258687Pseudomonas entomophila L48, complete genomecytidylate kinase (cytidine monophosphate (CMP) kinase)8e-61233
NC_008463:2017607:202320020232002023889690Pseudomonas aeruginosa UCBPP-PA14, complete genomecytidylate kinase1e-60233
NC_009439:2038303:204282820428282043493666Pseudomonas mendocina ymp, complete genomecytidylate kinase2e-60232
NC_016830:1901488:190594119059411906630690Pseudomonas fluorescens F113 chromosome, complete genomecytidylate kinase2e-60231
NC_015410:2144387:214892321489232149588666Pseudomonas mendocina NK-01 chromosome, complete genomecytidylate kinase6e-60230
NC_015733:1555476:155771315577131558399687Pseudomonas putida S16 chromosome, complete genomecytidylate kinase7e-60230
NC_015379:1887275:189172818917281892417690Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Cytidylate kinase9e-60229
NC_011770:2046490:205208320520832052772690Pseudomonas aeruginosa LESB58, complete genomecytidylate kinase8e-60229
NC_018080:1834754:184034718403471841036690Pseudomonas aeruginosa DK2 chromosome, complete genomecytidylate kinase8e-60229
NC_010322:1520973:152321015232101523896687Pseudomonas putida GB-1 chromosome, complete genomecytidylate kinase9e-59226
NC_016632:1138000:115232311523231153042720Serratia symbiotica str. 'Cinara cedri' chromosome, completecytidylate kinase3e-58224
NC_020209:997385:100183710018371002526690Pseudomonas poae RE*1-1-14, complete genomecytidylate kinase7e-58223
NC_012660:1804610:181014718101471810836690Pseudomonas fluorescens SBW25 chromosome, complete genomecytidylate kinase2e-57222
NC_004129:4993974:500889350088935009582690Pseudomonas fluorescens Pf-5, complete genomecytidylate kinase1e-56219
NC_009654:3215205:323221732322173232900684Marinomonas sp. MWYL1, complete genomecytidylate kinase1e-54213
NC_007404:974461:101776210177621018439678Thiobacillus denitrificans ATCC 25259, complete genomeCytidylate kinase2e-44179
NC_008702:1153344:1153344115334411553051962Azoarcus sp. BH72, complete genome3-phosphoshikimate 1-carboxyvinyltransferase4e-41167
NC_010524:1005355:1028428102842810305272100Leptothrix cholodnii SP-6, complete genome3-phosphoshikimate 1-carboxyvinyltransferase1e-39163
NC_008781:2925818:2939676293967629416792004Polaromonas naphthalenivorans CJ2, complete genome3-phosphoshikimate 1-carboxyvinyltransferase3e-37155
NC_014657:1193985:119803411980341198714681Caldicellulosiruptor owensensis OL chromosome, complete genomecytidylate kinase5e-37154
NC_010814:2275199:229365922936592294357699Geobacter lovleyi SZ, complete genomecytidylate kinase2e-35149
NC_015589:2999735:301718730171873017867681Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecytidylate kinase2e-35148
NC_011146:3720658:374871437487143749415702Geobacter bemidjiensis Bem, complete genomecytidylate kinase8e-35147
NC_002939:2844240:287299028729902873691702Geobacter sulfurreducens PCA, complete genomecytidylate kinase2e-34145
NC_018604:1385788:138849013884901389170681Brachyspira pilosicoli WesB complete genomecytidylate kinase4e-34144
NC_018607:1185195:118884911888491189529681Brachyspira pilosicoli B2904 chromosome, complete genomecytidylate kinase4e-34144
NC_016932:1041306:104526410452641045980717Corynebacterium pseudotuberculosis 316 chromosome, complete genomecytidylate kinase4e-34144
NC_014329:1041556:105364210536421054358717Corynebacterium pseudotuberculosis FRC41 chromosome, completecytidylate kinase2e-33142
NC_016781:1039716:105363310536331054349717Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecytidylate kinase2e-33142
NC_017031:1039548:105346510534651054181717Corynebacterium pseudotuberculosis P54B96 chromosome, completecytidylate kinase2e-33142
NC_017300:1045555:105111510511151051831717Corynebacterium pseudotuberculosis 1002 chromosome, completecytidylate kinase2e-33142
NC_017301:1037519:105327810532781053994717Corynebacterium pseudotuberculosis C231 chromosome, completecytidylate kinase2e-33142
NC_017303:1039562:105347910534791054195717Corynebacterium pseudotuberculosis I19 chromosome, complete genomecytidylate kinase2e-33142
NC_017305:1037133:105105010510501051766717Corynebacterium pseudotuberculosis PAT10 chromosome, completecytidylate kinase2e-33142
NC_009616:1604276:161046916104691611122654Thermosipho melanesiensis BI429 chromosome, complete genomecytidylate kinase6e-33140
NC_007516:413159:4151284151284165701443Synechococcus sp. CC9605, complete genomepantoate-beta-alanine ligase9e-33140
NC_007513:1807184:1829536182953618309871452Synechococcus sp. CC9902, complete genomeCytidylate kinase1e-32139
NC_015520:1683616:168775916877591688436678Mahella australiensis 50-1 BON chromosome, complete genomecytidylate kinase2e-32139
NC_016148:1175999:118553611855361186231696Thermovirga lienii DSM 17291 chromosome, complete genomecytidylate kinase3e-32138
NC_005070:1898612:1924948192494819264531506Synechococcus sp. WH 8102, complete genomeputative bifunctional enzyme; pantothenate synthetase/cytidylate kinase1e-31136
NC_017317:1143378:114519411451941145913720Corynebacterium ulcerans 809 chromosome, complete genomecytidylate kinase3e-31135
NC_015683:1146913:114804111480411148760720Corynebacterium ulcerans BR-AD22 chromosome, complete genomeCytidylate kinase3e-31135
NC_016783:1169821:119301111930111193736726Corynebacterium diphtheriae INCA 402 chromosome, complete genomecytidylate kinase1e-30132
NC_015875:1505034:150503415050341505705672Streptococcus pseudopneumoniae IS7493 chromosome, complete genomecytidylate kinase9e-29126
NC_015672:1921023:196276519627651963448684Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCytidylate kinase1e-28126
NC_014484:1163576:1189134118913411915362403Spirochaeta thermophila DSM 6192 chromosome, complete genome30S ribosomal protein S12e-28125
NC_020133:2421965:242350424235042424232729Mycobacterium liflandii 128FXT, complete genomecytidylate kinase, Cmk7e-28124
NC_021182:2667408:268809326880932688773681Clostridium pasteurianum BC1, complete genomecytidylate kinase6e-28124
NC_016630:1385719:139066113906611391317657Filifactor alocis ATCC 35896 chromosome, complete genomecytidylate kinase5e-28124
NC_014933:3942156:394215639421563942848693Bacteroides helcogenes P 36-108 chromosome, complete genomecytidylate kinase1e-27123
NC_017277:1717637:1739651173965117411921542Synechocystis sp. PCC 6803, complete genomebifunctional pantothenate synthetase/cytidylate kinase2e-27122
NC_017052:1717836:1739850173985017413911542Synechocystis sp. PCC 6803 substr. PCC-N, complete genomebifunctional pantothenate synthetase/cytidylate kinase2e-27122
NC_017039:1717848:1739862173986217414031542Synechocystis sp. PCC 6803 substr. PCC-P, complete genomebifunctional pantothenate synthetase/cytidylate kinase2e-27122
NC_000911:1718820:1740834174083417423751542Synechocystis sp. PCC 6803, complete genomepantothenate synthetase/cytidylate kinase2e-27122
NC_013939:2117663:213341221334122134092681Deferribacter desulfuricans SSM1, complete genomecytidylate kinase5e-27120
NC_016943:2391366:239136623913662392055690Blastococcus saxobsidens DD2, complete genomecytidylate kinase4e-25114
NC_019673:1988853:200909820090982009817720Saccharothrix espanaensis DSM 44229 complete genomeCytidylate kinase1e-23110
NC_013947:4695000:471765247176524718329678Stackebrandtia nassauensis DSM 44728 chromosome, complete genomecytidylate kinase9e-24110
NC_015703:3444025:346488934648893465662774Runella slithyformis DSM 19594 chromosome, complete genomeCytidylate kinase9e-24110
NC_009511:2726296:272828927282892728915627Sphingomonas wittichii RW1 chromosome, complete genomecytidylate kinase2e-23108
NC_002932:296557:297749297749298456708Chlorobium tepidum TLS, complete genomecytidylate kinase3e-21102
NC_009482:1761529:1788661178866117901991539Synechococcus sp. RCC307 chromosome, complete genomebifunctional pantoate ligase/cytidylate kinase4e-21101
NC_014215:1243125:126346212634621264133672Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase)3e-2098.6
NC_007799:392355:395004395004395645642Ehrlichia chaffeensis str. Arkansas, complete genomecytidylate kinase3e-2098.6
NC_013521:2193203:221053422105342211286753Sanguibacter keddieii DSM 10542, complete genomecytidylate kinase1e-1996.7
NC_014391:2579919:258390725839072584587681Micromonospora aurantiaca ATCC 27029 chromosome, complete genomecytidylate kinase2e-1996.3
NC_015125:222231:259158259158259931774Microbacterium testaceum StLB037, complete genomecytidylate kinase2e-1995.5
NC_008710:108057:124604124604125272669Borrelia turicatae 91E135, complete genomecytidylate kinase3e-1995.1
NC_010673:113133:124846124846125502657Borrelia hermsii DAH, complete genomecytidylate kinase4e-1891.7
NC_007354:845500:866149866149866793645Ehrlichia canis str. Jake, complete genomeCytidylate kinase5e-1891.3
NC_013169:1545890:155883715588371559583747Kytococcus sedentarius DSM 20547, complete genomecytidylate kinase2e-1789.4
NC_013757:3100515:311855231185523119241690Geodermatophilus obscurus DSM 43160, complete genomecytidylate kinase4e-1788.2
NC_015577:1974821:1974821197482119772442424Treponema azotonutricium ZAS-9 chromosome, complete genomecytidylate kinase/30S ribosomal protein S16e-1787.8
NC_012669:2399649:242066724206672421407741Beutenbergia cavernae DSM 12333, complete genomecytidylate kinase region8e-1684
NC_019908:748635:778628778628779017390Brachyspira pilosicoli P43/6/78 chromosome, complete genomecytidylate kinase Cmk2e-1479.7
NC_014330:2457731:246167424616742462063390Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative cytidylate kinase Cmk2e-1479.7
NC_015161:2018493:203915820391582039880723Deinococcus proteolyticus MRP chromosome, complete genomeCytidylate kinase3e-1168.6
NC_012803:1519138:153377115337711534502732Micrococcus luteus NCTC 2665, complete genomecytidylate kinase5e-0857.8