Pre_GI: BLASTP Hits

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Query: NC_011094:1050700:1069103 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1069103, End: 1069795, Length: 693

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014306:4901390:493250549325054933197693Erwinia billingiae Eb661, complete genomePutative inner membrane protein3e-60231
NC_015703:4348545:436190443619044362584681Runella slithyformis DSM 19594 chromosome, complete genomehypothetical protein2e-37155
NC_014625:1903277:191047519104751911230756Ketogulonicigenium vulgare Y25 chromosome, complete genometransmembrane protein1e-24113
NC_013037:578000:580553580553581239687Dyadobacter fermentans DSM 18053, complete genomeprotein of unknown function DUF4211e-1996.3
NC_016584:5420823:544254454425445443266723Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein1e-1479.7
NC_013205:747502:765816765816766676861Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,protein of unknown function DUF4212e-1479.3
NC_017167:674511:697130697130698029900Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein2e-1479.3
NC_014171:4933200:495128949512894952158870Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein2e-1273.2
NC_008600:4868000:488372948837294884604876Bacillus thuringiensis str. Al Hakam, complete genomehypothetical protein2e-1272.8
NC_003997:4852332:487054148705414871410870Bacillus anthracis str. Ames, complete genomehypothetical protein2e-1272.8
NC_007530:4853740:487066748706674871536870Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein2e-1272.8
NC_005945:4854951:487187848718784872747870Bacillus anthracis str. Sterne, complete genomehypothetical protein2e-1272.8
NC_011773:4914601:493303549330354933904870Bacillus cereus AH820 chromosome, complete genomehypothetical protein2e-1272.8
NC_012581:4856620:487299048729904873859870Bacillus anthracis str. CDC 684 chromosome, complete genomehypothetical protein2e-1272.8
NC_012659:4853640:487056748705674871436870Bacillus anthracis str. A0248, complete genomehypothetical protein2e-1272.8
NC_015873:2197412:221494622149462215599654Megasphaera elsdenii DSM 20460, complete genomehypothetical protein3e-1272.4
NC_013037:578000:581250581250581951702Dyadobacter fermentans DSM 18053, complete genomeprotein of unknown function DUF4211e-1170.1
NC_014650:2969866:299583729958372996697861Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein2e-1169.3
NC_019978:922978:928484928484929203720Halobacteroides halobius DSM 5150, complete genomehypothetical protein1e-1067
NC_003909:4831000:484746448474644848333870Bacillus cereus ATCC 10987, complete genomehypothetical protein1e-1066.6
NC_011777:161505:167055167055167924870Bacillus cereus AH820 plasmid pAH820_272, complete sequencehypothetical protein2e-1066.2
NC_015711:7265439:727182572718257272334510Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein4e-1065.1
NC_009674:3732000:374957237495723750441870Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehypothetical protein4e-1065.1
NC_009922:2323083:233937523393752340073699Alkaliphilus oremlandii OhILAs, complete genomeprotein of unknown function DUF4219e-1063.9
NC_007103:131000:132189132189132914726Bacillus cereus E33L plasmid pE33L466, complete sequencepossible membrane protein1e-0963.5
NC_020302:85821:110538110538111074537Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein1e-0963.2
NC_008752:3902637:393522739352273935703477Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein2e-0962.4
NC_017294:1385576:138557613855761386217642Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehypothetical protein3e-0962
NC_015138:3927411:394341039434103943886477Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehypothetical protein3e-0962
NC_010172:1199725:120855912085591209086528Methylobacterium extorquens PA1, complete genomehypothetical protein4e-0961.6
NC_011894:585637:590209590209590736528Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF4218e-0960.5
NC_011757:1246000:127290612729061273433528Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF4212e-0859.7
NC_017190:2002718:201205220120522012912861Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein2e-0859.3
NC_017190:3879148:389471438947143895574861Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein2e-0859.3
NC_014551:2057971:206729020672902068150861Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein2e-0859.3
NC_014551:3864127:387969338796933880553861Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein2e-0859.3
NC_013791:1507943:152445515244551525150696Bacillus pseudofirmus OF4 chromosome, complete genomehypothetical protein6e-0857.8
NC_011757:3540992:354303835430383543559522Methylobacterium chloromethanicum CM4, complete genomeprotein of unknown function DUF4212e-0756.6
NC_014479:736102:754650754650755345696Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein1e-0756.6
NC_013520:1638000:165331616533161654035720Veillonella parvula DSM 2008, complete genomeprotein of unknown function DUF4211e-0756.6
NC_014976:2981777:300227730022773002972696Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein2e-0755.8
NC_006274:4031246:403124640312464031950705Bacillus cereus E33L, complete genomehypothetical protein2e-0755.8
NC_004722:4117459:411745941174594118163705Bacillus cereus ATCC 14579, complete genomehypothetical Membrane Associated Protein4e-0755.1
NC_011725:4159000:415961641596164160320705Bacillus cereus B4264 chromosome, complete genomehypothetical protein4e-0755.1
CP002207:227118:245731245731246426696Bacillus atrophaeus 1942, complete genomehypothetical protein4e-0755.1
UCMB5137:303641:324233324233324934702Bacillus atrophaeus UCMB-5137hypothetical protein4e-0755.1
NC_014639:227118:245731245731246426696Bacillus atrophaeus 1942 chromosome, complete genomehypothetical protein4e-0755.1
NC_017208:4166008:416600841660084166712705Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein4e-0755.1
NC_014171:4039120:404018440401844040888705Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein5e-0754.7
NC_014041:4517999:451969245196924520213522Zunongwangia profunda SM-A87 chromosome, complete genomemembrane protein7e-0754.3
NC_003909:3941282:394181639418163942520705Bacillus cereus ATCC 10987, complete genomehypothetical protein7e-0754.3
NC_016047:876875:897375897375898070696Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein7e-0754.3
NC_015555:430054:438499438499439203705Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeprotein of unknown function DUF4216e-0754.3
NC_009633:4733678:474980447498044750517714Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein8e-0753.9
NC_011969:3879412:388298338829833883687705Bacillus cereus Q1 chromosome, complete genomehypothetical protein8e-0753.9
NC_011992:863174:880043880043880510468Acidovorax ebreus TPSY, complete genomehypothetical protein2e-0652.8
NC_019978:2506472:250685825068582507553696Halobacteroides halobius DSM 5150, complete genomehypothetical protein3e-0652.4
NC_015968:1618862:163208316320831632718636Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein4e-0652
NC_015563:3074691:308187830818783082339462Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-0652
NC_019842:680000:705528705528706217690Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein3e-0652
NC_009725:692237:715821715821716510690Bacillus amyloliquefaciens FZB42, complete genomeYetF3e-0652
NC_020272:3245834:324766732476673248356690Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein3e-0652
NC_020063:2011019:202069620206962021331636Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein3e-0652
NC_008578:889907:920160920160920777618Acidothermus cellulolyticus 11B, complete genomeprotein of unknown function DUF4219e-0650.4