Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:1050700:1065944 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1065944, End: 1066759, Length: 816

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007712:1601499:162716116271611628018858Sodalis glossinidius str. 'morsitans', complete genomeputative formate transport protein8e-116416
NC_004347:3028000:304015330401533041127975Shewanella oneidensis MR-1, complete genomeformate transporter, putative1e-70266
NC_014541:1617678:1626115162611516275391425Ferrimonas balearica DSM 9799 chromosome, complete genomeformate/nitrite transporter7e-66250
NC_009831:2045811:2051994205199420534691476Shewanella sediminis HAW-EB3, complete genomeformate/nitrite transporter3e-64245
NC_017096:1147441:115299911529991153835837Caldisericum exile AZM16c01, complete genomeputative formate transporter8e-41167
NC_014376:1217000:123655712365571237465909Clostridium saccharolyticum WM1 chromosome, complete genomeformate/nitrite transporter2e-39162
NC_008435:604772:604772604772605719948Rhodopseudomonas palustris BisA53, complete genomeformate/nitrite transporter5e-36151
NC_005773:5310339:532528553252855326100816Pseudomonas syringae pv. phaseolicola 1448A, complete genomeFormate transporter5e-25114
NC_007005:5500196:552150555215055522320816Pseudomonas syringae pv. syringae B728a, complete genomeFormate/nitrite transporter2e-24113
NC_013887:213699:228905228905229720816Methanocaldococcus sp. FS406-22 chromosome, complete genomeformate/nitrite transporter7e-23107
NC_012673:77610:858608586086699840Exiguobacterium sp. AT1b, complete genomeformate/nitrite transporter2e-20100
NC_019978:1244000:126194812619481262751804Halobacteroides halobius DSM 5150, complete genomeformate/nitrite transporter2e-2099.8
NC_014166:716000:725977725977726831855Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeformate/nitrite transporter4e-2098.6
NC_009515:1409912:142815014281501428953804Methanobrevibacter smithii ATCC 35061, complete genomeformate/nitrite transporter, FdhC1e-1997.1
NC_014976:759129:787843787843788643801Bacillus subtilis BSn5 chromosome, complete genomeputative formate/nitrite transporter2e-1996.3
NC_010674:3141228:314225231422523143019768Clostridium botulinum B str. Eklund 17B, complete genomeformate/nitrite family of transporter2e-1995.9
NC_013791:1082951:108999110899911090821831Bacillus pseudofirmus OF4 chromosome, complete genomeformate/nitrite transporter3e-1995.9
NC_014541:1617678:162410516241051624890786Ferrimonas balearica DSM 9799 chromosome, complete genomeformate/nitrite transporter3e-1995.5
NC_014393:1221000:122423112242311224998768Clostridium cellulovorans 743B chromosome, complete genomeformate/nitrite transporter7e-1787.8
NC_012659:3320933:332969033296903330469780Bacillus anthracis str. A0248, complete genomeputative formate transporter3e-1685.9
NC_012581:897957:908173908173908952780Bacillus anthracis str. CDC 684 chromosome, complete genomeputative formate transporter3e-1685.9
NC_007530:3321033:332979033297903330569780Bacillus anthracis str. 'Ames Ancestor', complete genomeformate transporter, putative3e-1685.9
NC_003997:3320906:332966333296633330442780Bacillus anthracis str. Ames, complete genomeformate transporter, putative3e-1685.9
NC_005945:3321600:333035733303573331136780Bacillus anthracis str. Sterne, complete genomeformate transporter, putative3e-1685.9
NC_011773:3399531:340938334093833410162780Bacillus cereus AH820 chromosome, complete genomeputative formate transporter5e-1685.1
NC_011773:3547507:356876635687663569581816Bacillus cereus AH820 chromosome, complete genomeputative formate transporter3e-1582.4
NC_003909:3483244:350449935044993505314816Bacillus cereus ATCC 10987, complete genomeformate transporter, putative6e-1581.3
NC_016614:822715:844230844230845078849Vibrio sp. EJY3 chromosome 2, complete sequenceformate dehydrogenase8e-1580.9
NC_003366:128783:130202130202130960759Clostridium perfringens str. 13, complete genomehypothetical protein1e-1480.5
NC_016641:2700765:270628827062882707076789Paenibacillus terrae HPL-003 chromosome, complete genometransporter2e-1480.1
NC_018697:825058:838838838838839647810Cycloclasticus sp. P1 chromosome, complete genomeFormate/nitrite transporter4e-1478.6
NC_014218:534986:554393554393555169777Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeformate/nitrite transporter4e-1272
NC_014727:853500:854219854219854989771Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,formate/nitrite family of transporter4e-1168.9
NC_012808:921985:924806924806925645840Methylobacterium extorquens AM1, complete genomeputative formate/nitrate transporter4e-1168.9
NC_010172:1222150:123482912348291235668840Methylobacterium extorquens PA1, complete genomeformate/nitrite transporter4e-1168.9
NC_011757:1246000:126184912618491262688840Methylobacterium chloromethanicum CM4, complete genomeformate/nitrite transporter4e-1168.9
NC_012988:1540587:156016215601621561001840Methylobacterium extorquens DM4, complete genomeformate/nitrate transporter4e-1168.9
NC_008740:220642:220642220642221490849Marinobacter aquaeolei VT8, complete genomeformate/nitrite transporter7e-1168.2
NC_012121:1894148:190740619074061908236831Staphylococcus carnosus subsp. carnosus TM300, complete genomeNirC protein8e-0961.2
NC_007168:665284:668501668501669322822Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0859.7
NC_017353:646195:647512647512648330819Staphylococcus lugdunensis N920143, complete genomeputative nitrite transporter4e-0858.9
NC_004461:2002000:202262920226292023450822Staphylococcus epidermidis ATCC 12228, complete genomeNirC protein5e-0858.2
NC_007622:271673:291949291949292770822Staphylococcus aureus RF122, complete genomeprobable formate/nitrite transport protein7e-0754.7
NC_016928:306629:330082330082330927846Staphylococcus aureus subsp. aureus M013 chromosome, completeformate/nitrite transporter family protein7e-0754.7
NC_002953:2435667:245477224547722455596825Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative nitrite transporter7e-0754.7
NC_007793:2510801:252627725262772527101825Staphylococcus aureus subsp. aureus USA300, complete genomeformate/nitrite transporter family protein7e-0754.7
NC_002951:2448000:246271124627112463535825Staphylococcus aureus subsp. aureus COL, complete genomeformate/nitrite transporter family protein7e-0754.7
NC_007795:2455468:247337624733762474200825Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeformate/nitrite transporter, putative7e-0754.7
NC_003923:2460130:247560624756062476430825Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein7e-0754.7
NC_009641:2513300:253120925312092532033825Staphylococcus aureus subsp. aureus str. Newman chromosome,formate/nitrite transporter family protein7e-0754.7
NC_017351:2489460:250553525055352506359825Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeformate/nitrite transporter family protein7e-0754.7
NC_017347:2511783:252725925272592528083825Staphylococcus aureus subsp. aureus T0131 chromosome, completeFNT family formate-nitrite transporter7e-0754.7
NC_017341:2544327:255980325598032560627825Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,formate/nitrite transporter family protein7e-0754.7
NC_016941:2395502:241178124117812412605825Staphylococcus aureus subsp. aureus MSHR1132, complete genomeputative nitrite transporter7e-0754.7
NC_016912:2329113:234458923445892345413825Staphylococcus aureus subsp. aureus VC40 chromosome, completeformate/nitrite transporter family protein7e-0754.7
NC_002745:2446722:246219924621992463023825Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein9e-0754.3
NC_002758:2515310:253321825332182534042825Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to NirC protein9e-0754.3
NC_009782:2519379:253485625348562535680825Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein9e-0754.3
NC_017343:2367177:238508523850852385909825Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeformate/nitrite transporter family protein9e-0754.3
NC_009632:2545419:256327725632772564101825Staphylococcus aureus subsp. aureus JH1 chromosome, completeformate/nitrite transporter9e-0754.3
NC_002953:303223:326064326064326888825Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative formate/nitrite transporter8e-0754.3
NC_002745:325932:347476347476348300825Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein8e-0754.3
NC_002758:325889:347433347433348257825Staphylococcus aureus subsp. aureus Mu50, complete genomesimilar to NirC protein8e-0754.3
NC_009782:325892:347436347436348260825Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein8e-0754.3
NC_013450:2463271:247874824787482479494747Staphylococcus aureus subsp. aureus ED98, complete genomeformate/nitrite transporter family protein1e-0653.5
NC_010079:2510951:252642725264272527134708Staphylococcus aureus subsp. aureus USA300_TCH1516, completeFNT family formate-nitrite transporter2e-0653.1
NC_017342:857630:860275860275861126852Staphylococcus aureus subsp. aureus TCH60 chromosome, completeformate/nitrite transporter6e-0651.6
NC_002952:2550500:256737825673782568202825Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative nitrite transporter6e-0651.6
NC_017338:2456000:247124424712442472068825Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeFormate/nitrite transporter family protein8e-0651.2
NC_016928:2411486:242713824271382427962825Staphylococcus aureus subsp. aureus M013 chromosome, completeformate/nitrite transporter family protein8e-0651.2