Pre_GI: BLASTP Hits

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Query: NC_011094:1050700:1063602 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1063602, End: 1065884, Length: 2283

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009801:995396:1017186101718610194682283Escherichia coli E24377A, complete genomeformate acetyltransferase01476
NC_007712:1601499:1624825162482516271072283Sodalis glossinidius str. 'morsitans', complete genomeformate acetyltransferase 101390
NC_004347:3028000:3042162304216230444442283Shewanella oneidensis MR-1, complete genomeformate acetyltransferase01268
NC_009831:2045811:2046645204664520489272283Shewanella sediminis HAW-EB3, complete genomeFormate C-acetyltransferase01242
NC_010498:3488513:3490352349035234926462295Escherichia coli SMS-3-5, complete genomeformate acetyltransferase01233
CU928160:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
CP002516:613462:6259516259516282452295Escherichia coli KO11, complete genomeformate acetyltransferase01231
NC_011748:3608917:3613700361370036159942295Escherichia coli 55989, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_009800:3307123:3308962330896233112562295Escherichia coli HS, complete genomeformate acetyltransferase01231
AC_000091:3258377:3258780325878032610742295Escherichia coli W3110 DNA, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
CP002185:3475991:3477828347782834801222295Escherichia coli W, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_000913:3256307:3258146325814632604402295Escherichia coli K12, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_010473:3354052:3355891335589133581852295Escherichia coli str. K-12 substr. DH10B, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
CU928145:3608917:3613700361370036159942295Escherichia coli 55989 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_016902:613462:6259516259516282452295Escherichia coli KO11FL chromosome, complete genomeformate acetyltransferase01231
NC_013941:3884725:3889508388950838918022295Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeKeto-acid formate acetyltransferase01231
NC_012967:3191319:3193158319315831954522295Escherichia coli B str. REL606 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_012947:630757:6450876450876473812295Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeformate acetyltransferase01231
NC_012759:3143455:3145294314529431475882295Escherichia coli BW2952 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_011741:3344746:3346585334658533488792295Escherichia coli IAI1 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01231
NC_011415:3523364:3528147352814735304412295Escherichia coli SE11 chromosome, complete genomeputative formate acetyltransferase 301231
NC_009801:3595001:3595001359500135972952295Escherichia coli E24377A, complete genomeformate acetyltransferase01230
NC_010658:3014371:3024716302471630270102295Shigella boydii CDC 3083-94, complete genomeformate acetyltransferase01230
NC_007613:2981829:2982232298223229845262295Shigella boydii Sb227, complete genomeprobable formate acetyltransferase 301229
NC_011751:3710786:3715570371557037178642295Escherichia coli UMN026 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01229
NC_004337:3249791:3251630325163032539242295Shigella flexneri 2a str. 301, complete genomeprobable formate acetyltransferase 301229
NC_004741:3240909:3242748324274832450422295Shigella flexneri 2a str. 2457T, complete genomeprobable formate acetyltransferase 301229
NC_017328:3289853:3291692329169232939862295Shigella flexneri 2002017 chromosome, complete genomeKeto-acid formate acetyltransferase01229
NC_010468:613812:6281426281426304362295Escherichia coli ATCC 8739, complete genomeformate acetyltransferase01229
NC_008258:3224721:3226560322656032288542295Shigella flexneri 5 str. 8401, complete genomeprobable formate acetyltransferase 301229
NC_002695:3994970:3999753399975340020472295Escherichia coli O157:H7 str. Sakai, complete genomeputative formate acetyltransferase 301229
NC_011750:3768692:3773475377347537757692295Escherichia coli IAI39 chromosome, complete genomepyruvate formate-lyase 4/2-ketobutyrate formate-lyase01226
NC_014618:586240:6080576080576103512295Enterobacter cloacae SCF1 chromosome, complete genomeformate acetyltransferase01206
NC_019970:35985:5853358533607612229Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeformate acetyltransferase 101035
NC_015555:49842:7171371713739412229Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeformate acetyltransferase01033
NC_017343:224777:2247772247772270262250Staphylococcus aureus subsp. aureus ECT-R 2, complete genomeformate acetyltransferase01006
NC_015275:1223088:1243865124386512460932229Clostridium lentocellum DSM 5427 chromosome, complete genomeformate acetyltransferase0965
NC_015709:1769806:1795826179582617981412316Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeformate acetyltransferase0950
NC_018750:3315309:3327502332750233297812280Streptomyces venezuelae ATCC 10712, complete genomePyruvate formate-lyase0941
NC_013093:2633000:2675503267550326777612259Actinosynnema mirum DSM 43827, complete genomeformate acetyltransferase0932
NC_015977:442493:4755774755774778052229Roseburia hominis A2-183 chromosome, complete genomeformate acetyltransferase0904
NC_014614:2500301:2523531252353125257742244Clostridium sticklandii, complete genomepyruvate formate lyase I0877
NC_016605:233087:2343352343352365932259Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeformate acetyltransferase0866
NC_013410:1285857:1287270128727012895252256Fibrobacter succinogenes subsp. succinogenes S85 chromosome,formate acetyltransferase0866
NC_017068:1216548:1233793123379312360242232Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative pyruvate formate-lyase0856
NC_010001:3421710:3443643344364334457032061Clostridium phytofermentans ISDg, complete genomeformate acetyltransferase0848
NC_014376:317312:3375993375993396592061Clostridium saccharolyticum WM1 chromosome, complete genomeformate acetyltransferase0836
NC_008618:1206157:1228494122849412308692376Bifidobacterium adolescentis ATCC 15703, complete genomeformate acetyltransferase0788
NC_013714:1521404:1544052154405215464272376Bifidobacterium dentium Bd1, complete genomepfl Formate acetyltransferase0787
NC_014933:2240000:2242892224289222451292238Bacteroides helcogenes P 36-108 chromosome, complete genomeformate acetyltransferase0783
NC_006448:1451729:1469630146963014719392310Streptococcus thermophilus LMG 18311, complete genomepyruvate formate-lyase2e-164580
NC_008527:611836:6316816316816340442364Lactococcus lactis subsp. cremoris SK11, complete genomePyruvate-formate lyase4e-159562
NC_014410:51711:7264772647748742228Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,5e-124445
NC_016938:193000:2130022130022154342433Melissococcus plutonius DAT561 chromosome 1, complete genomepyruvate formate-lyase1e-46188
NC_014363:1344768:1367739136773913701532415Olsenella uli DSM 7084 chromosome, complete genomepyruvate formate-lyase3e-45184
NC_002737:1670164:1705477170547717078942418Streptococcus pyogenes M1 GAS, complete genomeputative pyruvate formate-lyase 22e-42174
NC_008023:1707021:1728268172826817306852418Streptococcus pyogenes MGAS2096, complete genomeFormate acetyltransferase2e-42174
NC_011134:1854868:1873022187302218754392418Streptococcus equi subsp. zooepidemicus str. MGCS10565, completepyruvate formate-lyase5e-42173
NC_021182:4058873:4061331406133140637512421Clostridium pasteurianum BC1, complete genomepyruvate formate-lyase3e-41171
NC_013364:928486:9490679490679514992433Escherichia coli O111:H- str. 11128, complete genomeputative pyruvate formate lyase5e-41169
NC_013353:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009, complete genomepyruvate formate lyase5e-41169
AP010958:922937:9447969447969472282433Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted pyruvate formate lyase5e-41169
NC_014328:2872721:2875133287513328774872355Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase4e-39163
NC_014364:4488875:4505347450534745076892343Spirochaeta smaragdinae DSM 11293 chromosome, complete genomepyruvate formate-lyase4e-37157
NC_015424:2917817:2938443293844329408782436Aeromonas veronii B565 chromosome, complete genomeformate acetyltransferase 31e-36155
NC_013517:2055071:2057425205742520597222298Sebaldella termitidis ATCC 33386, complete genomepyruvate formate-lyase5e-36153
NC_009089:1283000:1316081131608113184532373Clostridium difficile 630, complete genomeglycerol dehydratase2e-34148
NC_014624:2297000:2309569230956923119532385Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein5e-33143
NC_015573:2463123:2501489250148925039782490Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFormate C-acetyltransferase1e-30135
NC_012108:481657:4926674926674950332367Desulfobacterium autotrophicum HRM2, complete genomePflD11e-30135
NC_009615:919495:9222889222889247202433Parabacteroides distasonis ATCC 8503 chromosome, complete genomeformate C-acetyltransferase1e-28128
NC_009633:3933941:3949827394982739523642538Alkaliphilus metalliredigens QYMF chromosome, complete genomeformate C-acetyltransferase2e-27124
NC_010001:1488000:1489322148932214919252604Clostridium phytofermentans ISDg, complete genomepyruvate formate-lyase1e-25118
NC_010723:1465097:1473488147348814760282541Clostridium botulinum E3 str. Alaska E43, complete genomeformate C-acetyltransferase2e-25118
NC_010674:1496500:1503275150327515058152541Clostridium botulinum B str. Eklund 17B, complete genomeformate C-acetyltransferase2e-25118
NC_009438:212476:2279922279922305352544Shewanella putrefaciens CN-32 chromosome, complete genomepyruvate formate-lyase5e-25116
NC_008750:450233:4655524655524680952544Shewanella sp. W3-18-1, complete genomepyruvate formate-lyase5e-25116
NC_020063:3690308:3716693371669337190712379Enterobacteriaceae bacterium strain FGI 57, complete genomepyruvate-formate lyase7e-24113
NC_009943:1043210:1060198106019810625462349Candidatus Desulfococcus oleovorans Hxd3, complete genomeFormate C-acetyltransferase1e-23112
NC_004557:1553000:1563237156323715657772541Clostridium tetani E88, complete genomeformate acetyltransferase 21e-23112
NC_014363:114239:1374171374171400532637Olsenella uli DSM 7084 chromosome, complete genomeFormate C-acetyltransferase8e-24112
NC_010102:283364:305348305348305731384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-23110
NC_012563:2384500:2398878239887824014182541Clostridium botulinum A2 str. Kyoto, complete genomeformate acetyltransferase6e-23110
NC_009495:2244774:2255474225547422580142541Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeformate acetyltransferase5e-23110
NC_009697:2173000:2184116218411621866562541Clostridium botulinum A str. ATCC 19397 chromosome, completeformate acetyltransferase5e-23110
NC_009698:2171151:2184335218433521868752541Clostridium botulinum A str. Hall chromosome, complete genomeformate acetyltransferase5e-23110
NC_009699:2287893:2304693230469323072332541Clostridium botulinum F str. Langeland chromosome, complete genomeformate acetyltransferase5e-23110
NC_017297:2288000:2304809230480923073492541Clostridium botulinum F str. 230613 chromosome, complete genomeformate acetyltransferase5e-23110
NC_016818:3736213:373763137376313738014384Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeacid-induced glycyl radical enzyme4e-23110
NC_014328:4316008:4331070433107043336192550Clostridium ljungdahlii ATCC 49587 chromosome, complete genomepyruvate formate-lyase4e-23110
NC_006138:656000:6722656722656746162352Desulfotalea psychrophila LSv54, complete genomeformate C-acetyltransferase3e-23110
NC_009922:2556033:2573187257318725757362550Alkaliphilus oremlandii OhILAs, complete genomeFormate C-acetyltransferase9e-23109
NC_004431:4270305:4315437431543743179892553Escherichia coli CFT073, complete genomehypothetical protein8e-23109
NC_012658:2295536:2312844231284423153842541Clostridium botulinum Ba4 str. 657 chromosome, complete genomeformate acetyltransferase6e-23109
NC_015224:3587500:358755035875503587933384Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,autonomous glycyl radical cofactor GrcA6e-23109
NC_008800:1090000:112371111237111124094384Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,autonomous glycyl radical cofactor GrcA6e-23109
NC_020064:3609844:360984436098443610227384Serratia marcescens FGI94, complete genomeacid-induced glycyl radical enzyme2e-22108
NC_008309:502983:520757520757521140384Haemophilus somnus 129PT, complete genomepossible acid-induced glycyl radical protein2e-22108
NC_010519:2033980:203491120349112035294384Haemophilus somnus 2336 chromosome, complete genomeautonomous glycyl radical cofactor GrcA2e-22108
NC_010001:1745089:1755519175551917580652547Clostridium phytofermentans ISDg, complete genomeFormate C-acetyltransferase1e-22108
NC_016048:3856665:3869661386966138720362376Oscillibacter valericigenes Sjm18-20, complete genomepyruvate formate-lyase family protein1e-22108
NC_017027:1329708:133065213306521331035384Pasteurella multocida subsp. multocida str. HN06 chromosome,autonomous glycyl radical cofactor GrcA2e-22107
NC_010278:398521:407319407319407705387Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,autonomous glycyl radical cofactor GrcA3e-22107
NC_009053:393700:402489402489402875387Actinobacillus pleuropneumoniae L20, complete genomeautonomous glycyl radical cofactor3e-22107
NC_010939:405477:430201430201430587387Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeautonomous glycyl radical cofactor3e-22107
NC_012912:1200000:122155712215571221940384Dickeya zeae Ech1591, complete genomeformate C-acetyltransferase glycine radical5e-22106
NC_021182:966839:9668399668399693252487Clostridium pasteurianum BC1, complete genomepyruvate-formate lyase5e-20100
NC_010001:3421710:344307534430753443323249Clostridium phytofermentans ISDg, complete genomeformate C-acetyltransferase glycine radical4e-20100
NC_014376:317312:336997336997337242246Clostridium saccharolyticum WM1 chromosome, complete genomeformate C-acetyltransferase glycine radical2e-1998.6
NC_016584:5625975:5640307564030756428502544Desulfosporosinus orientis DSM 765 chromosome, complete genomepyruvate-formate lyase2e-1998.6
NC_015577:3621777:3644332364433236465362205Treponema azotonutricium ZAS-9 chromosome, complete genomeputative formate C-acetyltransferase2e-1378.2
NC_019673:6259229:627693762769376277281345Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-0965.5
NC_021184:657093:6648106648106674102601Desulfotomaculum gibsoniae DSM 7213, complete genomepyruvate-formate lyase4e-0964.3