Pre_GI: BLASTP Hits

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Query: NC_011094:1050700:1052302 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1052302, End: 1053594, Length: 1293

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:1668795:1668795166879516700871293Yersinia pestis Angola, complete genomeseryl-tRNA synthetase0770
NC_002947:4484824:4508780450878045100601281Pseudomonas putida KT2440, complete genomeseryl-tRNA synthetase3e-168591
NC_015733:3736104:3831520383152038328001281Pseudomonas putida S16 chromosome, complete genomeseryl-tRNA synthetase8e-168590
NC_013851:1866523:1877506187750618787801275Allochromatium vinosum DSM 180 chromosome, complete genomeseryl-tRNA synthetase2e-157555
NC_009074:2914053:2930712293071229320131302Burkholderia pseudomallei 668 chromosome I, complete sequenceseryl-tRNA synthetase6e-157554
NC_016010:1822212:1823821182382118251011281Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeseryl-tRNA synthetase2e-156552
NC_003902:1858349:1862425186242518637051281Xanthomonas campestris pv. campestris str. ATCC 33913, completeseryl-tRNA synthetase4e-155547
NC_016002:1326500:1351185135118513524711287Pseudogulbenkiania sp. NH8B, complete genomeseryl-tRNA synthetase2e-154546
NC_014307:1131241:1145662114566211469781317Ralstonia solanacearum CFBP2957 chromosome, complete genomeserine tRNA synthetase; also charges selenocystein tRNA with serine1e-154546
NC_010682:2642269:2656705265670526580211317Ralstonia pickettii 12J chromosome 1, complete sequenceseryl-tRNA synthetase8e-155546
NC_015856:3170771:3193141319314131944901350Collimonas fungivorans Ter331 chromosome, complete genomeseryl-tRNA synthetase2e-154545
NC_003295:2507850:2534810253481025361261317Ralstonia solanacearum GMI1000, complete genomeseryl-tRNA synthetase3e-154545
NC_012856:2266187:2280675228067522819911317Ralstonia pickettii 12D chromosome 1, complete genomeseryl-tRNA synthetase9e-154543
NC_013446:4281250:4296269429626942975851317Comamonas testosteroni CNB-2, complete genomeseryl-tRNA synthetase1e-148526
NC_014315:2177277:2182520218252021838031284Nitrosococcus watsoni C-113 chromosome, complete genomeseryl-tRNA synthetase3e-148525
NC_015138:4205986:4227522422752242288411320Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeseryl-tRNA synthetase2e-147522
NC_008610:1068429:1074537107453710758261290Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),seryl-tRNA synthetase2e-146518
NC_015422:1116359:1120112112011211214281317Alicycliphilus denitrificans K601 chromosome, complete genomeSeryl-tRNA synthetase9e-145513
NC_008781:3508784:3532055353205535333891335Polaromonas naphthalenivorans CJ2, complete genomeseryl-tRNA synthetase1e-144513
NC_009465:938378:9415159415159428041290Candidatus Vesicomyosocius okutanii HA, complete genomeseryl-tRNA synthetase4e-144511
NC_014931:5088125:5114458511445851157891332Variovorax paradoxus EPS chromosome, complete genomeseryl-tRNA synthetase2e-141502
NC_017223:2618535:2637330263733026386851356Bordetella pertussis CS chromosome, complete genomeseryl-tRNA synthetase4e-133474
NC_002927:4130697:4150574415057441519291356Bordetella bronchiseptica RB50, complete genomeseryl-tRNA synthetase4e-133474
NC_002937:255790:2706662706662719401275Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeseryl-tRNA synthetase3e-131469
NC_014152:1:1632816328175991272Thermincola sp. JR, complete genomeseryl-tRNA synthetase9e-129460
NC_015589:7678:2706427064283381275Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeseryl-tRNA synthetase1e-127456
NC_019815:114288:1182781182781195821305Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiseryl-tRNA synthetase7e-126451
NC_014220:2398334:1325913259145301272Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeseryl-tRNA synthetase7e-126450
NC_016148:951446:9580159580159592861272Thermovirga lienii DSM 17291 chromosome, complete genomeseryl-tRNA synthetase1e-124447
NC_004461:1:1164811648129341287Staphylococcus epidermidis ATCC 12228, complete genomeseryl-tRNA synthetase7e-123441
NC_011567:1:2161821618228981281Anoxybacillus flavithermus WK1, complete genomeSeryl-tRNA synthetase9e-123440
NC_014976:2231984:2232896223289622341731278Bacillus subtilis BSn5 chromosome, complete genomeseryl-tRNA synthetase4e-122438
NC_017208:1:2022420224214981275Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeseryl-tRNA synthetase6e-122437
NC_014171:1:2044620446217201275Bacillus thuringiensis BMB171 chromosome, complete genomeseryl-tRNA synthetase2e-121436
NC_010556:6612:2187221872231491278Exiguobacterium sibiricum 255-15, complete genomeseryl-tRNA synthetase3e-121435
NC_015519:245036:2586572586572599341278Tepidanaerobacter sp. Re1 chromosome, complete genomeSeryl-tRNA synthetase7e-121434
NC_004668:3156247:3172906317290631741771272Enterococcus faecalis V583, complete genomeseryl-tRNA synthetase3e-120432
NC_002939:47406:4740647406486741269Geobacter sulfurreducens PCA, complete genomeseryl-tRNA synthetase3e-120432
NC_019978:7535:2557525575268581284Halobacteroides halobius DSM 5150, complete genomeseryl-tRNA synthetase6e-120431
NC_018867:10238:1023810238115031266Dehalobacter sp. CF chromosome, complete genomeSeryl-tRNA synthetase4e-120431
UCMB5137:1375622:1393525139352513948021278Bacillus atrophaeus UCMB-5137seryl-tRNA synthetase4e-120431
NC_018665:1:2182421824231011278Exiguobacterium antarcticum B7 chromosome, complete genomeSeryl-tRNA synthetase4e-120431
NC_014836:312353:3301653301653314571293Desulfurispirillum indicum S5 chromosome, complete genomeseryl-tRNA synthetase8e-120430
NC_016894:1092005:1094783109478310960541272Acetobacterium woodii DSM 1030 chromosome, complete genomeseryl-tRNA synthetase SerS2e-119429
NC_015975:267994:2719142719142731881275Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSeryl-tRNA synthetase2e-119429
NC_014926:1108811:1121592112159211228751284Thermovibrio ammonificans HB-1 chromosome, complete genomeseryl-tRNA synthetase1e-118427
NC_019970:8938:2776127761290321272Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeseryl-tRNA synthetase2e-118426
NC_010424:14657:1465714657159341278Candidatus Desulforudis audaxviator MP104C, complete genomeseryl-tRNA synthetase2e-118426
NC_014410:8694:2750427504287751272Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,seryl-tRNA synthetase3e-118425
NC_014831:8965:1269712697139741278Thermaerobacter marianensis DSM 12885 chromosome, complete genomeseryl-tRNA synthetase2e-117422
NC_007644:3229:2198221982232651284Moorella thermoacetica ATCC 39073, complete genomeseryl-tRNA synthetase3e-117422
NC_015757:4680:1173811738130121275Sulfobacillus acidophilus TPY chromosome, complete genomeseryl-tRNA synthetase7e-117421
NC_006177:12383:1238312383136481266Symbiobacterium thermophilum IAM 14863, complete genomeseryl-tRNA synthetase8e-117421
NC_008686:2417000:2433457243345724347491293Paracoccus denitrificans PD1222 chromosome 1, complete sequenceseryl-tRNA synthetase3e-116419
NC_011653:466007:4824614824614837411281Thermosipho africanus TCF52B, complete genomeseryl-tRNA synthetase6e-115414
NC_010674:1:1771017710189871278Clostridium botulinum B str. Eklund 17B, complete genomeseryl-tRNA synthetase1e-114413
NC_009922:1:1890018900201771278Alkaliphilus oremlandii OhILAs, complete genomeseryl-tRNA synthetase1e-114413
NC_010483:1441614:1459212145921214604891278Thermotoga sp. RQ2, complete genomeseryl-tRNA synthetase4e-114411
NC_007929:210088:2159732159732172501278Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSeryl-tRNA synthetase4e-114411
NC_015520:224136:2413902413902426641275Mahella australiensis 50-1 BON chromosome, complete genomeseryl-tRNA synthetase6e-114411
NC_013316:1:1771317713189841272Clostridium difficile R20291, complete genomeseryl-tRNA synthetase1e-112407
NC_018607:2231975:2234339223433922356191281Brachyspira pilosicoli B2904 chromosome, complete genomeseryl-tRNA synthetase2e-112406
NC_014330:888366:8906938906938919731281Brachyspira pilosicoli 95/1000 chromosome, complete genomeseryl-tRNA synthetase2e-112406
NC_019908:2312194:2328457232845723297371281Brachyspira pilosicoli P43/6/78 chromosome, complete genomeseryl-tRNA synthetase2e-112406
NC_018604:2350054:2352417235241723536971281Brachyspira pilosicoli WesB complete genomeseryl-tRNA synthetase1e-112406
NC_009089:1:1795217952192231272Clostridium difficile 630, complete genomeseryl-tRNA synthetase2e-112405
NC_008783:507939:5283515283515296281278Bartonella bacilliformis KC583, complete genomeseryl-tRNA synthetase2e-112405
NC_010999:1979989:1991871199187119931541284Lactobacillus casei, complete genomeSeryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS)5e-112404
NC_014334:1775781:1787662178766217889451284Lactobacillus casei str. Zhang chromosome, complete genomeseryl-tRNA synthetase6e-112404
NC_008526:1822000:1831033183103318323161284Lactobacillus casei ATCC 334, complete genomeSeryl-tRNA synthetase7e-112404
NC_013205:19295:1929519295205751281Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,seryl-tRNA synthetase1e-110400
NC_013198:1921500:1931359193135919326421284Lactobacillus rhamnosus GG, complete genomeSeryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS)2e-110399
NC_009663:2023941:2027301202730120285451245Sulfurovum sp. NBC37-1, complete genomeseryl-tRNA synthetase3e-110398
NC_008530:1551356:1582064158206415833741311Lactobacillus gasseri ATCC 33323, complete genomeSeryl-tRNA synthetase5e-109395
NC_013504:1468227:1496120149612014974301311Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein6e-109394
NC_013199:1886271:1897641189764118989241284Lactobacillus rhamnosus Lc 705, complete genomeseryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine-tRNA ligase) (SerRS)7e-109394
NC_005362:1651767:1686282168628216875921311Lactobacillus johnsonii NCC 533, complete genomeseryl-tRNA synthetase4e-108391
NC_014393:19279:2122321223225031281Clostridium cellulovorans 743B chromosome, complete genomeseryl-tRNA synthetase7e-108390
NC_015214:1700000:1714981171498117162881308Lactobacillus acidophilus 30SC chromosome, complete genomeseryl-tRNA synthetase3e-107389
NC_014724:1731238:1746213174621317475201308Lactobacillus amylovorus GRL 1112 chromosome, complete genomeseryl-tRNA synthetase3e-107389
NC_018528:1681060:1696420169642016977271308Lactobacillus helveticus R0052 chromosome, complete genomeseryl-tRNA ligase4e-106385
NC_010080:1685280:1699511169951117008181308Lactobacillus helveticus DPC 4571, complete genomeSeryl-tRNA synthetase4e-106385
NC_015602:1339067:1352932135293213542391308Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeseryl-tRNA synthetase4e-105382
NC_007797:441782:4417824417824430681287Anaplasma phagocytophilum HZ, complete genomeseryl-tRNA synthetase6e-105381
NC_014314:576465:5843275843275855681242Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeseryl-tRNA synthetase9e-97353
NC_013743:375459:3939233939233953021380Haloterrigena turkmenica DSM 5511, complete genomeseryl-tRNA synthetase2e-92339
NC_007633:952728:9694519694519707191269Mycoplasma capricolum subsp. capricolum ATCC 27343, completeseryl-tRNA synthetase1e-91337
NC_014751:946155:9628959628959641631269Mycoplasma leachii PG50 chromosome, complete genomeserine--tRNA ligase3e-91335
NC_019974:192862:2093172093172106961380Natronococcus occultus SP4, complete genomeseryl-tRNA synthetase2e-89329
NC_014448:183013:1849641849641862321269Mycoplasma hyorhinis HUB-1 chromosome, complete genomeSeryl-trna synthetase protein2e-87323
NC_009712:1446472:1468175146817514694521278Candidatus Methanoregula boonei 6A8, complete genomeseryl-tRNA synthetase2e-86319
NC_010085:1358772:1373878137387813751431266Nitrosopumilus maritimus SCM1, complete genomeseryl-tRNA synthetase4e-86318
NC_013222:299683:3790943790943803651272Robiginitalea biformata HTCC2501, complete genomeseryl-tRNA synthetase2e-85317
NC_015177:2795487:2839682283968228409531272Pedobacter saltans DSM 12145 chromosome, complete genomeseryl-tRNA synthetase3e-83309
NC_015638:877233:8796358796358809061272Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeseryl-tRNA synthetase4e-81302
NC_011565:750168:7704797704797717531275Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,seryl-tRNA synthetase5e-80298
NC_014820:71565:7424674246755021257Cenarchaeum symbiosum A, complete genomeseryl-tRNA synthetase6e-75281
NC_013715:98000:1167901167901180971308Rothia mucilaginosa DY-18, complete genomeseryl-tRNA synthetase2e-73276
NC_006085:2384892:2404111240411124053851275Propionibacterium acnes KPA171202, complete genomeseryl-tRNA synthetase6e-70265
NC_014039:2320307:2339541233954123408151275Propionibacterium acnes SK137 chromosome, complete genomeserine--tRNA ligase6e-70265
NC_016511:2321999:2342473234247323437471275Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeseryl-tRNA synthetase6e-70265
NC_016516:2314115:2333332233333223346061275Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeseryl-tRNA synthetase6e-70265
NC_019942:596000:6042676042676055861320Aciduliprofundum sp. MAR08-339, complete genomeseryl-tRNA synthetase9e-70264
NC_015125:2288487:2289942228994222912071266Microbacterium testaceum StLB037, complete genomeseryl-tRNA synthetase1e-69264
NC_016512:2322598:2341815234181523430891275Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeseryl-tRNA synthetase5e-69261
NC_013093:125363:1253631253631266131251Actinosynnema mirum DSM 43827, complete genomeseryl-tRNA synthetase7e-68258
NC_008818:1244612:1255765125576512571471383Hyperthermus butylicus DSM 5456, complete genomeSeryl-tRNA synthetase6e-67255
NC_013714:570329:5745645745645758501287Bifidobacterium dentium Bd1, complete genomeserS Seryl-tRNA synthetase1e-66254
NC_003106:1457802:1469902146990214712631362Sulfolobus tokodaii str. 7, complete genomeseryl-tRNA synthetase4e-65249
NC_013172:783097:7852847852847865551272Brachybacterium faecium DSM 4810, complete genomeseryl-tRNA synthetase1e-62241
NC_012622:1395601:1402643140264314040161374Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeseryl-tRNA synthetase4e-62239
NC_017275:1436875:1468071146807114694441374Sulfolobus islandicus HVE10/4 chromosome, complete genomeseryl-tRNA synthetase9e-62238
NC_013769:1478546:1509741150974115111141374Sulfolobus islandicus L.D.8.5 chromosome, complete genomeseryl-tRNA synthetase9e-62238
NC_012632:1543735:1549715154971515510881374Sulfolobus islandicus M.16.27 chromosome, complete genomeseryl-tRNA synthetase9e-62238
NC_012623:1141951:1154076115407611554491374Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeseryl-tRNA synthetase9e-62238
NC_012589:1502390:1513270151327015146431374Sulfolobus islandicus L.S.2.15, complete genomeseryl-tRNA synthetase9e-62238
NC_012588:1419318:1425298142529814266711374Sulfolobus islandicus M.14.25 chromosome, complete genomeseryl-tRNA synthetase1e-61237
NC_014499:63365:6718067180682081029Candidatus Sulcia muelleri CARI chromosome, complete genomeseryl-tRNA synthetase6e-61235
NC_015931:1405859:1411536141153614129271392Pyrolobus fumarii 1A, complete genomeseryl-tRNA synthetase2e-60233
NC_014374:264563:2653472653472667261380Acidilobus saccharovorans 345-15 chromosome, complete genomeSeryl-tRNA synthetase9e-60231
NC_002754:513790:5264025264025277751374Sulfolobus solfataricus P2, complete genomeseryl-tRNA synthetase1e-59230
NC_013123:59918:5991859918611951278Candidatus Sulcia muelleri SMDSEM, complete genomeseryl-tRNA synthetase8e-52204
NC_005213:202400:2800442800442814981455Nanoarchaeum equitans Kin4-M, complete genomeseryl-tRNA synthetase4e-32139
NC_015422:1116359:113330111333011133432132Alicycliphilus denitrificans K601 chromosome, complete genome4e-0963.2