Pre_GI: BLASTP Hits

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Query: NC_011083:967260:972340 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 972340, End: 972723, Length: 384

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:924326:929406929406929789384Salmonella enterica subsp. enterica serovar Newport str. SL254,biofilm regulator BssR9e-60228
NC_003197:920000:925085925085925468384Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-58224
NC_010102:2178594:219282021928202193203384Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-58224
NC_011094:973140:978220978220978603384Salmonella enterica subsp. enterica serovar Schwarzengrund strbiofilm formation regulatory protein BssR2e-58224
NC_011205:944125:949205949205949588384Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853biofilm formation regulatory protein BssR2e-58224
NC_011274:896802:901882901882902265384Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91biofilm formation regulatory protein BssR2e-58224
NC_011294:878896:883976883976884359384Salmonella enterica subsp. enterica serovar Enteritidis strbiofilm formation regulatory protein BssR2e-58224
NC_012125:894955:900035900035900418384Salmonella enterica subsp. enterica serovar Paratyphi C strainbiofilm formation regulatory protein BssR2e-58224
NC_016810:919266:924346924346924729384Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-58224
NC_016831:2108557:212281821228182123201384Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-58224
NC_016856:921057:926137926137926520384Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sbiofilm formation regulatory protein BssR2e-58224
NC_016857:919266:924346924346924729384Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74biofilm regulator BssR2e-58224
NC_016860:959609:964689964689965072384Salmonella enterica subsp. enterica serovar Typhimurium strbiofilm formation regulatory protein BssR2e-58224
NC_016863:920346:925426925426925809384Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1biofilm formation regulatory protein BssR2e-58224
NC_017046:919249:924329924329924712384Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-58224
NC_016612:3314846:331646733164673316850384Klebsiella oxytoca KCTC 1686 chromosome, complete genomebiofilm formation regulatory protein BssR4e-30129