Pre_GI: BLASTP Hits

Some Help

Query: NC_011083:862901:878146 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 878146, End: 878352, Length: 207

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:2287934:229408422940842294293210Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0961.2
NC_011080:819103:834260834260834466207Salmonella enterica subsp. enterica serovar Newport str. SL254,oxaloacetate decarboxylase gamma chain 22e-0858.2
NC_011149:779903:793582793582793791210Salmonella enterica subsp. enterica serovar Agona str. SL483,oxaloacetate decarboxylase gamma chain 32e-1167.4
NC_016857:819429:829124829124829369246Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74oxaloacetate decarboxylase subunit gamma8e-1372.4
NC_016860:857500:868737868737868943207Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit gamma1e-1272
NC_012125:793812:807068807068807310243Salmonella enterica subsp. enterica serovar Paratyphi C strainoxaloacetate decarboxylase subunit gamma4e-1063.5
NC_016863:819478:830210830210830455246Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1oxaloacetate decarboxylase subunit gamma8e-1372.4
NC_017046:819414:829109829109829354246Salmonella enterica subsp. enterica serovar Typhimurium str. 798oxaloacetate decarboxylase subunit gamma8e-1372.4
NC_016810:819489:829124829124829369246Salmonella enterica subsp. enterica serovar Typhimurium stroxaloacetate decarboxylase subunit gamma8e-1372.4
NC_011205:839425:854090854090854299210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oxaloacetate decarboxylase subunit gamma2e-1167.4
NC_016856:819482:830210830210830455246Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Soxaloacetate decarboxylase subunit gamma8e-1372.4
NC_011294:781170:789021789021789269249Salmonella enterica subsp. enterica serovar Enteritidis stroxaloacetate decarboxylase subunit gamma1e-1168.2
NC_003197:815964:829868829868830113246Salmonella typhimurium LT2, complete genomeputative oxaloacetate decarboxylase subunit gamma8e-1372.4
NC_006905:848000:858514858514858753240Salmonella enterica subsp. enterica serovar Choleraesuis strputative oxaloacetate decarboxylase subunit gamma2e-0754.7