Pre_GI: BLASTP Hits

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Query: NC_011083:4547825:4592037 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 4592037, End: 4592579, Length: 543

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010498:2278306:2292586229258622942051620Escherichia coli SMS-3-5, complete genomeISL3 family transposase4e-78290
NC_004431:1166568:117035811703581170861504Escherichia coli CFT073, complete genomehypothetical protein4e-76283
CU928145:4792703:479435747943574795040684Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein, putative transposase (fragment)2e-75281
NC_011748:4792703:479435747943574795040684Escherichia coli 55989, complete genomeconserved hypothetical protein, putative transposase (fragment)2e-75281
NC_004337:3049118:306579930657993066305507Shigella flexneri 2a str. 301, complete genomehypothetical protein2e-75281
NC_017328:3088907:310558731055873106093507Shigella flexneri 2002017 chromosome, complete genomeputative transposase2e-75281
NC_016846:24500:306163061631119504Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,putative transposase5e-66249
NC_004431:324000:334492334492334875384Escherichia coli CFT073, complete genomehypothetical protein6e-54209
CP002797:2062006:207964120796412080498858Escherichia coli NA114, complete genomeputative transposase1e-40165
AP010958:2455052:246921624692162470199984Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-38159
NC_013353:2455052:246921624692162470199984Escherichia coli O103:H2 str. 12009, complete genome1e-38159
NC_010498:1094000:109451310945131095496984Escherichia coli SMS-3-5, complete genomeISL3 family transposase9e-39159
NC_004431:2304280:233639823363982336559162Escherichia coli CFT073, complete genomehypothetical protein1e-2099.4
NC_018750:6132619:6162249616224961636371389Streptomyces venezuelae ATCC 10712, complete genomeputative IS6 family transposase4e-1787.4
NC_003155:299873:3053113053113069451635Streptomyces avermitilis MA-4680, complete genomeIS6 family transposase4e-1580.9
NC_009921:4035225:4041045404104540421061062Frankia sp. EAN1pec, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein5e-1477.4
NC_016587:523215:5301665301665315421377Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencetransposase of ISAli11, ISL3 family3e-1374.7
NC_012034:1925983:192866619286661929196531Anaerocellum thermophilum DSM 6725, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein1e-1272.8
NC_020050:296702:3090373090373107011665Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialtransposase family protein1e-1272.8
NC_011892:352652:3526523526523542891638Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completetransposase IS204/IS1001/IS1096/IS1165 family protein3e-1271.6
NC_011894:3161289:3201131320113132025941464Methylobacterium nodulans ORS 2060, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein3e-1271.6
NC_008278:514600:5305715305715319801410Frankia alni ACN14a, complete genomePutative transposase5e-1270.9
NC_008435:1131242:113624811362481137051804Rhodopseudomonas palustris BisA53, complete genomehypothetical protein3e-1168.2
NC_007958:4371125:437460043746004374956357Rhodopseudomonas palustris BisB5, complete genomeputative transposase4e-1167.4
NC_012848:320883:3335873335873351431557Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,transposase IS204/IS1001/IS1096/IS1165 family protein5e-1167.4
NC_019970:439969:4423644423644436531290Thermoanaerobacterium thermosaccharolyticum M0795, complete genometransposase family protein9e-1166.6
NC_011894:6295807:6308799630879963104871689Methylobacterium nodulans ORS 2060, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein3e-1065.1
NC_020126:8512908:8528792852879285305131722Myxococcus stipitatus DSM 14675, complete genometransposase5e-1063.9
NC_009921:4757148:476679447667944767045252Frankia sp. EAN1pec, complete genomeputative transposase5e-1063.9
NC_016582:10326938:103479231034792310348282360Streptomyces bingchenggensis BCW-1 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein3e-0961.2
NC_009012:3591687:359319835931983593467270Clostridium thermocellum ATCC 27405, complete genometransposase7e-0960.1
NC_021177:118710:1321001321001336321533Streptomyces fulvissimus DSM 40593, complete genomePutative IS transposase2e-0755.1
NC_003903:260796:2793232793232808641542Streptomyces coelicolor A3(2) plasmid SCP1, complete sequenceinsertion element is466s transposase4e-0754.3
NC_003888:3817000:3829043382904338305841542Streptomyces coelicolor A3(2), complete genometransposase4e-0754.3
NC_009718:1272296:1275694127569412768811188Fervidobacterium nodosum Rt17-B1, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein8e-0753.5
NC_018681:5551000:5577490557749055790791590Nocardia brasiliensis ATCC 700358 chromosome, complete genometransposase IS204/IS1001/IS1096/IS1165 family protein9e-0753.1
NC_003888:3817000:3827457382745738289621506Streptomyces coelicolor A3(2), complete genometransposase9e-0753.1
NC_010003:1360472:139211513921151392333219Petrotoga mobilis SJ95, complete genome2e-0652.4
NC_009380:4702815:4705943470594347074781536Salinispora tropica CNB-440 chromosome, complete genometransposase, IS204/IS1001/IS1096/IS1165 family protein3e-0651.6
NC_012673:2535427:256578625657862565950165Exiguobacterium sp. AT1b, complete genome9e-0649.7