Pre_GI: BLASTP Hits

Some Help

Query: NC_011083:4547825:4586333 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 4586333, End: 4586464, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:3287671:330849133084913308790300Escherichia coli O26:H11 str. 11368 chromosome, complete genomeISEc16 transposase OrfA2e-0651.6
NC_012214:1212616:122482812248281225127300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A7e-0649.3
NC_012214:1650523:165875516587551659054300Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf A7e-0649.3
NC_012214:1650523:166992116699211670220300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, orf A7e-0649.3
NC_012214:1355500:137029913702991370598300Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf B7e-0649.3
NC_007946:4779745:481616448161644816463300Escherichia coli UTI89, complete genomehypothetical protein1e-0548.9