Pre_GI: BLASTP Hits

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Query: NC_011083:3009760:3024563 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 3024563, End: 3024676, Length: 114

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2867766:291198129119812912094114Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-1269.3
NC_011080:2982346:302820630282063028319114Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein6e-1269.3
NC_016832:2859491:287358028735802873693114Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-1165.9