Pre_GI: BLASTP Hits

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Query: NC_011083:2375061:2378548 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 2378548, End: 2379219, Length: 672

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:2323017:232650423265042327175672Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit UmuD1e-131468
NC_010102:683444:714177714177714848672Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-131468
NC_016863:2324293:233070623307062331209504Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit9e-97352
NC_016857:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit2e-89328
NC_016856:2379027:238251423825142382984471Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit2e-89328
NC_016810:2325190:232867723286772329147471Salmonella enterica subsp. enterica serovar Typhimurium strDNA polymerase V subunit2e-89328
NC_003197:2327474:233096123309612331431471Salmonella typhimurium LT2, complete genomeDNA polymerase V subunit2e-89328
NC_009436:1141376:115397511539751154361387Enterobacter sp. 638, complete genomeDNA polymerase V subunit6e-54210
NC_014121:3627588:363302036330203633319300Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-35149
NC_011283:2836000:289026328902632890745483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD1e-20100
NC_011283:3177350:318657131865713187053483Klebsiella pneumoniae 342 chromosome, complete genomeDNA polymerase V subunit UmuD1e-2099.8
NC_009648:1541699:159551215955121595931420Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA polymerase V subunit UmuD2e-2099.4
NC_016810:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium strDNA repair protein4e-2097.8
NC_016856:2085283:209256820925682092987420Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SDNA polymerase V subunit UmuD4e-2097.8
NC_016857:2027311:203873120387312039150420Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74DNA polymerase V subunit UmuD4e-2097.8
NC_016863:2029340:204076020407602041179420Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1DNA polymerase V subunit UmuD4e-2097.8
NC_015566:3269469:328448832844883284913426Serratia sp. AS12 chromosome, complete genomepeptidase S24/S26A/S26B7e-2097.4
NC_009792:1739970:174737317473731747789417Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-2097.4
NC_004631:948054:981317981317981736420Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUmuD protein8e-2097.1
NC_020211:2123819:213673021367302137125396Serratia marcescens WW4, complete genomeSOS mutagenesis and repair protein UmuD1e-1996.3
NC_010473:1245284:127023112702311270650420Escherichia coli str. K-12 substr. DH10B, complete genomeDNA polymerase V, subunit D7e-1994
NC_009801:1296488:132144813214481321867420Escherichia coli E24377A, complete genomeprotein UmuD7e-1994
NC_008253:1228485:125123812512381251657420Escherichia coli 536, complete genomeUmuD protein7e-1994
NC_011751:1446073:147704214770421477461420Escherichia coli UMN026 chromosome, complete genomeDNA polymerase V subunit UmuD7e-1994
NC_012967:1205985:123091712309171231336420Escherichia coli B str. REL606 chromosome, complete genomeDNA polymerase V subunit UmuD7e-1994
NC_011745:1287714:131060513106051311024420Escherichia coli ED1a chromosome, complete genomeDNA polymerase V subunit UmuD6e-1994
NC_016514:2476359:248828724882872488781495Enterobacter cloacae EcWSU1 chromosome, complete genomeUmuD2e-1892.4
NC_004431:1443968:146808314680831468502420Escherichia coli CFT073, complete genomeUmuD protein3e-1891.7
NC_011742:1221416:124553912455391245958420Escherichia coli S88 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1891.7
NC_011601:1315746:133733613373361337755420Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA polymerase V subunit UmuD5e-1891.3
NC_021066:1778000:178527517852751785694420Raoultella ornithinolytica B6, complete genomeDNA polymerase V subunit UmuD7e-1890.5
NC_009436:2395913:240450524045052404924420Enterobacter sp. 638, complete genomeDNA polymerase V subunit UmuD1e-1789.7
NC_017047:1934430:194357819435781944000423Rahnella aquatilis HX2 chromosome, complete genomeDNA polymerase V subunit UmuD3e-1788.6
NC_014842:19411:458674586746373507Pantoea sp. At-9b plasmid pPAT9B05, complete sequencepeptidase S24/S26A/S26B6e-1787.8
NC_006856:95830:100863100863101300438Salmonella enterica subsp. enterica serovar Choleraesuis strImpA7e-1787.4
NC_015761:1599000:160588716058871606315429Salmonella bongori NCTC 12419, complete genomeDNA repair protein7e-1787.4
NC_008570:2216736:225027522502752250697423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeumuD protein1e-1686.7
NC_020064:1962172:197446219744621974884423Serratia marcescens FGI94, complete genomeSOS response transcriptional repressor, RecA-mediated autopeptidase1e-1686.7
NC_007941:11319:558295582956266438Escherichia coli UTI89 plasmid pUTI89, complete sequenceUV protection and mutation protein3e-1685.1
NC_015424:2726223:276526527652652765627363Aeromonas veronii B565 chromosome, complete genomepeptidase S24-like domain-containing protein7e-1684
NC_003228:2245181:224994922499492250386438Bacteroides fragilis NCTC 9343, complete genomeputative UmuD/RumA DNA repair protein7e-1684
NC_006347:2190000:219226021922602192703444Bacteroides fragilis YCH46, complete genomeerror-prone repair: SOS-response transcriptional repressor UmuD homolog7e-1684
NC_016776:2237404:224094922409492241392444Bacteroides fragilis 638R, complete genomeputative UmuD/RumA DNA repair protein7e-1684
NC_009436:2056000:206974720697472070181435Enterobacter sp. 638, complete genomeprophage repressor2e-1582.8
NC_012108:442493:456512456512456931420Desulfobacterium autotrophicum HRM2, complete genomeUmuD12e-1582.4
NC_008570:1143578:116544011654401165883444Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeprotein UmuD6e-1580.9
NC_015167:1154497:115575611557561156190435Cellulophaga lytica DSM 7489 chromosome, complete genomepeptidase S24/S26A/S26B2e-1479.7
NC_009927:253250:254670254670255101432Acaryochloris marina MBIC11017 plasmid pREB2, complete sequenceSOS mutagenesis protein UmuD, putative2e-1479.3
NC_014304:77715:878618786188307447Erwinia billingiae Eb661 plasmid pEB102, complete sequenceProtein SamA2e-1479
NC_007604:1586243:160612916061291606689561Synechococcus elongatus PCC 7942, complete genomeDNA polymerase V3e-1478.6
NC_006576:2683467:709970997659561Synechococcus elongatus PCC 6301, complete genomeDNA polymerase V3e-1478.6
NC_014305:97055:112117112117112545429Erwinia billingiae Eb661 plasmid pEB170, complete sequenceDNA polymerase V subunit4e-1478.2
NC_015970:19850:238292382924263435Rhodothermus marinus SG0.5JP17-172 plasmid pRHOM17201, completepeptidase S24/S26A/S26B4e-1478.2
NC_015424:3520783:355284035528403553283444Aeromonas veronii B565 chromosome, complete genomeprotein UmuD5e-1477.8
NC_013282:1842412:184946718494671849934468Cronobacter turicensis, complete genomeProtein umuD9e-1477
NC_020260:1293860:130024713002471300684438Cronobacter sakazakii Sp291, complete genomeDNA polymerase V subunit UmuD9e-1477
NC_008740:1357312:136883113688311369268438Marinobacter aquaeolei VT8, complete genomeputative prophage repressor1e-1376.6
NC_005071:671084:688212688212688706495Prochlorococcus marinus str. MIT 9313, complete genomeputative SOS mutagenesis protein UmuD1e-1376.6
NC_014394:2577949:258904525890452589485441Gallionella capsiferriformans ES-2 chromosome, complete genomePeptidase S24/S26A/S26B, conserved region1e-1376.6
NC_014532:3596097:362965336296533630096444Halomonas elongata DSM 2581, complete genomehypothetical protein3e-1375.1
NC_015572:2186394:218769221876922188171480Methylomonas methanica MC09 chromosome, complete genomepeptidase S24/S26A/S26B4e-1374.7
NC_008255:1701195:171908717190871719515429Cytophaga hutchinsonii ATCC 33406, complete genomepeptidase, S24 family, UV repair protein5e-1374.7
NC_007516:1086948:110718511071851107616432Synechococcus sp. CC9605, complete genomeputative SOS mutagenesis protein UmuD1e-1273.6
NC_011881:1:390939094340432Arthrobacter chlorophenolicus A6 plasmid pACHL02, completepeptidase S24 and S26 domain protein1e-1273.6
NC_016002:1741109:175018817501881750616429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein2e-1272.4
NC_016002:2179969:218853921885392188967429Pseudogulbenkiania sp. NH8B, complete genomepeptidase S24 and S26 domain containing protein2e-1272.4
NC_010554:2646806:272478627247862725235450Proteus mirabilis HI4320, complete genomeDNA repair protein4e-1271.6
NC_016445:89500:106849106849107298450Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA polymerase V6e-1271.2
NC_012668:3037345:303929130392913039740450Vibrio cholerae MJ-1236 chromosome 1, complete sequenceerror-prone repair protein UmuD6e-1271.2
NC_015410:2351464:238028123802812380712432Pseudomonas mendocina NK-01 chromosome, complete genomeprotein MucA3e-1168.6
NC_007626:2204767:224721922472192247689471Magnetospirillum magneticum AMB-1, complete genomeSOS-response transcriptional repressors4e-1168.2
NC_007963:1552761:156563415656341566074441Chromohalobacter salexigens DSM 3043, complete genomeputative prophage repressor4e-1168.2
NC_011757:276953:292315292315292770456Methylobacterium chloromethanicum CM4, complete genomepeptidase S24 and S26 domain protein5e-1167.8
NC_016816:2925459:293812829381282938367240Pantoea ananatis LMG 5342, complete genomeDNA polymerase V subunit UmuD8e-1167.4
NC_011761:1499500:151324615132461513740495Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeumuD protein1e-1067
NC_008341:29038:461294612946572444Nitrosomonas eutropha C91 plasmid1, complete sequenceputative prophage repressor1e-1066.6
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1066.6
NC_016816:4129299:417061241706124171037426Pantoea ananatis LMG 5342, complete genomeUV protection protein1e-1066.6
NC_012969:1574330:159093015909301591391462Methylovorus glucosetrophus SIP3-4 chromosome, complete genomepeptidase S24 and S26 domain-containing protein1e-1066.6
NC_012988:4262631:426666942666694267061393Methylobacterium extorquens DM4, complete genomeDNA polymerase V subunit D1e-1066.6
NC_009453:36599:513145131451745432Arthrobacter sp. Rue61a plasmid pAL1, complete sequenceputative UmuD-like protein2e-1066.2
NC_010725:356609:361808361808362272465Methylobacterium populi BJ001, complete genomepeptidase S24 and S26 domain protein2e-1066.2
NC_009800:2049346:206330220633022063505204Escherichia coli HS, complete genomehypothetical protein3e-1065.5
NC_014733:1223359:123140312314031231840438Methylovorus sp. MP688 chromosome, complete genomepeptidase s24 and s26 domain protein1e-0963.2
NC_015703:4483500:451653045165304516979450Runella slithyformis DSM 19594 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region2e-0962.4
NC_016609:8251438:825282782528278253261435Niastella koreensis GR20-10 chromosome, complete genomeSOS response UmuD protein5e-0961.2
NC_016856:1411579:142176914217691421954186Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-0961.2
NC_014323:3976351:398335939833593983784426Herbaspirillum seropedicae SmR1 chromosome, complete genomeSOS mutagenesis protein6e-0960.8
NC_013716:4306695:433331543333154333674360Citrobacter rodentium ICC168, complete genomeputative SOS response protein8e-0960.5
NC_005966:2653945:267389626738962674522627Acinetobacter sp. ADP1, complete genomecomponent of DNA polymerase V1e-0860.1
NC_011662:2320100:233366623336662334121456Thauera sp. MZ1T, complete genomepeptidase S24 and S26 domain protein1e-0860.1
NC_012559:1497548:152788615278861528506621Laribacter hongkongensis HLHK9, complete genomeUmuD protein1e-0860.1
NC_014910:1912552:191889019188901919375486Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s24/s26a/s26b, conserved region protein7e-0857.4
NC_010510:534024:541392541392541844453Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completepeptidase S24 and S26 domain protein7e-0857.4
NC_020418:2868000:288122828812282881533306Morganella morganii subsp. morganii KT, complete genomeError-prone repair protein UmuD2e-0756.2
NC_009512:5632591:565849256584925658920429Pseudomonas putida F1, complete genomeputative prophage repressor3e-0755.5
NC_016832:948029:979172979172979411240Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Protein umuD'3e-0755.5
NC_017046:2026672:203809220380922038331240Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA repair protein3e-0755.5
NC_015222:2475792:249340424934042494024621Nitrosomonas sp. AL212 chromosome, complete genomepeptidase S24/S26A/S26B, conserved region3e-0755.5
NC_011894:4013830:401775640177564018211456Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein3e-0755.5
NC_015731:2460248:246163624616362462241606Nitrosomonas sp. Is79A3 chromosome, complete genomepeptidase S24/S26A/S26B7e-0754.3
NC_014838:254322:262946262946263185240Pantoea sp. At-9b plasmid pPAT9B01, complete sequencehypothetical protein1e-0653.5
NC_013361:649518:658683658683658988306Escherichia coli O26:H11 str. 11368 chromosome, complete genome2e-0652.4
NC_013941:733286:741625741625741930306Escherichia coli O55:H7 str. CB9615 chromosome, complete genometail fiber assembly protein2e-0652.4
AC_000091:558920:582098582098582283186Escherichia coli W3110 DNA, complete genomehypothetical protein2e-0652.4
NC_010473:498252:521430521430521615186Escherichia coli str. K-12 substr. DH10B, complete genome2e-0652.4
NC_000913:558920:582098582098582283186Escherichia coli K12, complete genomeDLP12 prophage; predicted protein2e-0652.4
NC_010473:623810:634690634690634875186Escherichia coli str. K-12 substr. DH10B, complete genome2e-0652.4
NC_004431:1352906:137255413725541372820267Escherichia coli CFT073, complete genomeHypothetical protein ylcE2e-0652.4
NC_011415:644811:655089655089655394306Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-0652.4
NC_007508:4476726:448566244856624486141480Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative polymerase V subunit4e-0651.6
NC_011894:585637:622354622354622869516Methylobacterium nodulans ORS 2060, complete genomepeptidase S24 and S26 domain protein4e-0651.6
NC_017328:2090679:210082021008202101089270Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein6e-0650.8
NC_004741:2009769:202189520218952022164270Shigella flexneri 2a str. 2457T, complete genomeputative bacteriophage protein6e-0650.8
NC_008258:2045000:205388620538862054155270Shigella flexneri 5 str. 8401, complete genomehypothetical bacteriophage protein6e-0650.8
NC_003902:3514000:352392035239203524399480Xanthomonas campestris pv. campestris str. ATCC 33913, completepolymerase V subunit8e-0650.4