Pre_GI: BLASTP Hits

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Query: NC_011083:1761352:1768108 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 1768108, End: 1768263, Length: 156

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016857:1670112:167685916768591677014156Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-23107
NC_011205:1633353:164844516484451648600156Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-23107
NC_011080:1709612:171635917163591716514156Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein3e-23107
NC_016831:1468691:147543814754381475593156Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-22104
NC_011149:1429523:148698814869881487137150Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-1788.6