Pre_GI: BLASTP Hits

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Query: NC_011083:1524337:1540739 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 1540739, End: 1543324, Length: 2586

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:2858228:2909821290982129124182598Alicycliphilus denitrificans K601 chromosome, complete genomeDEAD/DEAH box helicase domain-containing protein0913
NC_010162:9502480:9514067951406795168022736Sorangium cellulosum 'So ce 56', complete genomehypothetical protein5e-125449
NC_014973:595153:6205616205616230532493Geobacter sp. M18 chromosome, complete genometype III restriction protein res subunit1e-55218
NC_015634:3017564:3025986302598630284992514Bacillus coagulans 2-6 chromosome, complete genomeP-loop containing nucleoside triphosphate hydrolase5e-38160
NC_003037:1245645:1257344125734412598812538Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencehypothetical protein1e-36155
NC_009714:292470:2978292978293003662538Campylobacter hominis ATCC BAA-381, complete genomedead/deah box helicase domain-containing protein9e-34145
NC_020387:1257163:1270970127097012734592490Dehalococcoides mccartyi BTF08, complete genomeDEAD-like helicase2e-33145
NC_013552:1187299:1201618120161812041072490Dehalococcoides sp. VS, complete genomeDEAD-like helicase2e-33145
NC_009921:8147947:8165208816520881677302523Frankia sp. EAN1pec, complete genomehelicase c29e-33142
NC_020272:84227:9397193971964602490Bacillus amyloliquefaciens IT-45, complete genomeDEAD-like helicase9e-33142
NC_010397:4909957:4937972493797249405092538Mycobacterium abscessus chromosome Chromosome, complete sequenceConserved hypothetical protein (helicase?)2e-31138
NC_010617:1467000:1475248147524814777402493Kocuria rhizophila DC2201, complete genomehypothetical protein4e-29130
NC_008789:1237969:1246569124656912491482580Halorhodospira halophila SL1, complete genomeDEAD-like helicases-like2e-28128
NC_003413:1847935:1862800186280018650942295Pyrococcus furiosus DSM 3638, complete genomeATP-dependent RNA helicase, putative2e-0758.5
NC_000868:269923:2849512849512872092259Pyrococcus abyssi GE5, complete genomeatp-dependent rna helicase, eif-4a family7e-0757
NC_017191:1173989:1174902117490211768211920Bacillus amyloliquefaciens XH7 chromosome, complete genomeATP-dependent helicase6e-0653.5
NC_017190:2130651:2282243228224322841621920Bacillus amyloliquefaciens LL3 chromosome, complete genomeATP-dependent helicase6e-0653.5
NC_017188:1172181:1173325117332511752441920Bacillus amyloliquefaciens TA208 chromosome, complete genomeATP-dependent helicase6e-0653.5