Pre_GI: BLASTP Hits

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Query: NC_011083:1524337:1536740 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 1536740, End: 1537705, Length: 966

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007520:903799:905931905931906827897Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-59229
NC_007492:857428:875977875977876957981Pseudomonas fluorescens PfO-1, complete genomePhage integrase1e-37156
NC_007404:974461:100104010010401001963924Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein3e-36152
NC_010501:734363:757539757539758519981Pseudomonas putida W619, complete genomephage integrase1e-34147
NC_020209:5077410:5090808509080850925711764Pseudomonas poae RE*1-1-14, complete genomephage integrase5e-34145
NC_010501:5442000:545084254508425451822981Pseudomonas putida W619, complete genomephage integrase2e-32140
NC_017986:1885613:190477419047741905754981Pseudomonas putida ND6 chromosome, complete genomephage integrase family protein4e-32138
NC_016830:381049:392430392430393407978Pseudomonas fluorescens F113 chromosome, complete genomephage integrase3e-28126
NC_009445:6621996:666222866622286663148921Bradyrhizobium sp. ORS 278 chromosome, complete genomeDNA breaking-rejoining protein5e-2098.6
NC_013861:728648:732020732020732916897Legionella longbeachae NSW150, complete genomeintegrase2e-1893.6
NC_007761:2071500:207329720732972074172876Rhizobium etli CFN 42, complete genomeputative integrase protein4e-1892.4
NC_007484:667879:674774674774675640867Nitrosococcus oceani ATCC 19707, complete genomeputative integrase6e-1891.7
NC_017986:1885613:189024518902451891219975Pseudomonas putida ND6 chromosome, complete genomeputative phage integrase1e-1687.4
NC_014394:1626699:1642255164225516433551101Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein1e-1687.4
NC_002929:3305682:331128233112823311983702Bordetella pertussis Tohama I, complete genome3e-1685.9
NC_017223:3345902:335150233515023352203702Bordetella pertussis CS chromosome, complete genome3e-1685.9
NC_009434:3434381:345266034526603453523864Pseudomonas stutzeri A1501, complete genomeintegrase8e-1684.7
NC_008740:1484531:149853214985321499452921Marinobacter aquaeolei VT8, complete genomehypothetical protein5e-1582
NC_021150:5298500:530303753030375303900864Azotobacter vinelandii CA6, complete genomeintegrase3e-1479.3
NC_012560:5338707:534514553451455346008864Azotobacter vinelandii DJ, complete genomeintegrase3e-1479.3
NC_010801:629347:6321036321036332331131Burkholderia multivorans ATCC 17616 chromosome 3, completetyrosine recombinase6e-1375.1
NC_016589:2312570:2331191233119123324501260Burkholderia sp. YI23 chromosome 1, complete sequenceFis family transcriptional regulator4e-1272.4
NC_007948:1574881:1605461160546116069241464Polaromonas sp. JS666, complete genomehypothetical protein1e-1067.8
NC_012660:5793200:580167858016785802652975Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase2e-1066.6
NC_008786:4579490:4580576458057645817361161Verminephrobacter eiseniae EF01-2, complete genomephage integrase, N-terminal SAM-like protein1e-0861.2
NC_010682:1624985:1646510164651016476971188Ralstonia pickettii 12J chromosome 1, complete sequencetranscriptional regulator, Fis family2e-0860.5
NC_010424:531727:539070539070539927858Candidatus Desulforudis audaxviator MP104C, complete genomephage integrase family protein3e-0859.3
NC_002927:960369:981172981172981885714Bordetella bronchiseptica RB50, complete genomeputative integrase1e-0654.7
NC_009832:4482500:450178445017844502683900Serratia proteamaculans 568, complete genomehypothetical protein9e-0651.2