Pre_GI: BLASTP Hits

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Query: NC_011080:780850:806356 Salmonella enterica subsp. enterica serovar Newport str. SL254,

Start: 806356, End: 809157, Length: 2802

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. Antimicrobial resistance (Newport MDR-AmpC) is particularly problematic in this serotype, and the prevalence of Newport MDR-AmpC isolates from humans in the United States has increased from 0% during 1996-1997 to 26% in 2001. MDR strains have been recorded as resistant to ampicillin, chloramphenicol, streptomycin, sulphonamides and tetracycline (ACSSuT) and many of these strains show intermediate or full resistance to third-generation cephalosporins, kanamycin, potentiated sulphonamides, and gentamicin. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:842038:8674948674948702952802Salmonella enterica subsp. enterica serovar Schwarzengrund str2-oxoglutarate dehydrogenase E101953
NC_011083:824659:8501548501548529552802Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oxoglutarate dehydrogenase (succinyl-transferring), E1 component01953
NC_003198:751779:7765277765277793282802Salmonella enterica subsp. enterica serovar Typhi str. CT18,2-oxoglutarate dehydrogenase E1 component01953
NC_003197:776238:8017458017458045462802Salmonella typhimurium LT2, complete genome2-oxoglutarate dehydrogenase01951
NC_016810:775649:8011568011568039572802Salmonella enterica subsp. enterica serovar Typhimurium str2-oxoglutarate dehydrogenase E1 component01951
NC_016856:776735:8022428022428050432802Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Salpha-ketoglutarate decarboxylase01951
NC_016857:775649:8011568011568039572802Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74alpha-ketoglutarate decarboxylase01951
NC_016860:816000:8405758405758433762802Salmonella enterica subsp. enterica serovar Typhimurium str2-oxoglutarate dehydrogenase E1 component01951
NC_016863:776734:8022418022418050422802Salmonella enterica subsp. enterica serovar Typhimurium str. UK-12-oxoglutarate dehydrogenase E1 component01951
NC_017046:775636:8011428011428039432802Salmonella enterica subsp. enterica serovar Typhimurium str. 7982-oxoglutarate dehydrogenase E1 component01951
NC_003143:1233128:1257007125700712598142808Yersinia pestis CO92, complete genome2-oxoglutarate dehydrogenase E1 component01737
NC_017154:1225500:1248297124829712511042808Yersinia pestis D106004 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component01737
NC_017265:1136000:1158337115833711611442808Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,2-oxoglutarate decarboxylase01737
NC_012779:2755338:2756605275660527594122808Edwardsiella ictaluri 93-146, complete genomeoxoglutarate dehydrogenase01619
NC_009092:1874888:1902267190226719050892823Shewanella loihica PV-4, complete genome2-oxoglutarate dehydrogenase, E1 subunit01365
NC_009656:3817261:3821535382153538243512817Pseudomonas aeruginosa PA7 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component01169
NC_009434:2006500:2023089202308920259202832Pseudomonas stutzeri A1501, complete genomealpha-ketoglutarate decarboxylase01162
NC_015740:1845370:1860718186071818635492832Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2-oxoglutarate dehydrogenase E1 component01160
NC_018012:4184500:4196539419653941993672829Thiocystis violascens DSM 198 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component01054
NC_008781:1973826:1977412197741219803032892Polaromonas naphthalenivorans CJ2, complete genome2-oxoglutarate dehydrogenase, E1 subunit0998
NC_005085:1096000:1116795111679511196232829Chromobacterium violaceum ATCC 12472, complete genome2-oxoglutarate dehydrogenase E1 component0981
NC_011060:2099255:2099255209925521020832829Pelodictyon phaeoclathratiforme BU-1, complete genome2-oxoglutarate dehydrogenase, E1 subunit0963
NC_008767:927810:9296589296589324862829Neisseria meningitidis FAM18, complete genomeputative 2-oxoglutarate dehydrogenase E1 component0955
NC_018677:111500:1293901293901320382649Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete2-oxoglutarate dehydrogenase E1 component0912
NC_018507:115346:1358521358521385002649Candidatus Portiera aleyrodidarum BT-B chromosome, complete genome2-oxoglutarate dehydrogenase, E1 component0912
NC_010336:996661:1049336104933610521402805Francisella philomiragia subsp. philomiragia ATCC 25017, completeOxoglutarate dehydrogenase (succinyl-transferring)0881
NC_015696:517941:5707845707845735882805Francisella sp. TX077308 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0880
NC_008601:1733940:1745470174547017482832814Francisella tularensis subsp. novicida U112, complete genome2-oxoglutarate dehydrogenase complex, E1 component, 2-oxoglutarate decarboxylase0871
NC_016933:66854:7720577205800182814Francisella tularensis TIGB03 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0869
NC_016937:66854:7720577205800182814Francisella tularensis subsp. tularensis TI0902 chromosome,2-oxoglutarate dehydrogenase E1 component0869
NC_009257:151737:1620761620761649012826Francisella tularensis subsp. tularensis WY96-3418 chromosome,2-oxoglutarate dehydrogenase E1 component0869
NC_008369:1702885:1714463171446317172762814Francisella tularensis subsp. holarctica OSU18, complete genomeoxoglutarate dehydrogenase (succinyl-transferring)0868
NC_008245:66852:7719177191800162826Francisella tularensis subsp. tularensis FSC 198, complete genome2-oxoglutarate dehydrogenase E1 component0868
NC_009749:1699152:1710730171073017135552826Francisella tularensis subsp. holarctica FTA, complete genome2-oxoglutarate dehydrogenase, E1 component0868
NC_007880:1703346:1714831171483117176442814Francisella tularensis subsp. holarctica, complete genome2-oxoglutarate dehydrogenase E1 component0868
NC_009446:351042:3510423510423537952754Dichelobacter nodosus VCS1703A, complete genome2-oxoglutarate dehydrogenase, E1 component0850
NC_007205:221539:2369222369222398252904Candidatus Pelagibacter ubique HTCC1062, complete genome2-oxoglutarate dehydrogenase E1 component0840
NC_012846:2299282:2318462231846223214613000Bartonella grahamii as4aup, complete genomealpha-ketoglutarate dehydrogenase0827
NC_005955:1540838:1559800155980015627993000Bartonella quintana str. Toulouse, complete genomeAlpha-ketoglutarate dehydrogenase0825
NC_015380:412277:4310354310354339862952Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0809
NC_016929:197403:2121722121722149612790Rickettsia canadensis str. CA410 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0804
NC_009879:200419:2111832111832139722790Rickettsia canadensis str. McKiel, complete genomealpha-ketoglutarate decarboxylase0800
NC_004342:1213202:1226754122675412295162763Leptospira interrogans serovar Lai str. 56601 chromosome I,2-oxoglutarate dehydrogenase decarboxylase component0800
NC_009883:343067:3537423537423565252784Rickettsia bellii OSU 85-389, complete genomealpha-ketoglutarate decarboxylase0798
NC_009881:236500:2416582416582444442787Rickettsia akari str. Hartford, complete genomealpha-ketoglutarate decarboxylase0797
NC_016050:236000:2409812409812437672787Rickettsia japonica YH, complete genome2-oxoglutarate dehydrogenase E1 component0797
NC_016931:232981:2383112383112410972787Rickettsia massiliae str. AZT80 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0796
NC_015866:233448:2400362400362428222787Rickettsia heilongjiangensis 054 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0796
NC_003103:225956:2339782339782367642787Rickettsia conorii str. Malish 7, complete genome2-oxoglutarate dehydrogenase e1 component [EC:1.2.4.2]0796
NC_009900:231983:2406952406952434812787Rickettsia massiliae MTU5, complete genome2-oxoglutarate dehydrogenase E1 component0795
NC_017042:310000:3186073186073213932787Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, complete2-oxoglutarate dehydrogenase E1 component0794
NC_019907:819165:8263978263978293152919Liberibacter crescens BT-1 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0791
NC_017028:316000:3210273210273238132787Candidatus Rickettsia amblyommii str. GAT-30V chromosome, complete2-oxoglutarate dehydrogenase E1 component0791
NC_012730:332500:3430653430653458512787Rickettsia peacockii str. Rustic, complete genomealpha-ketoglutarate decarboxylase0790
NC_010263:232482:2378492378492406352787Rickettsia rickettsii str. Iowa, complete genome2-oxoglutarate dehydrogenase E1 component0789
NC_016909:230000:2377092377092404952787Rickettsia rickettsii str. Arizona chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0789
NC_016911:232481:2377972377972405832787Rickettsia rickettsii str. Hauke chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0789
NC_016913:917500:9284799284799312652787Rickettsia rickettsii str. Brazil chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0789
NC_016914:231324:2379362379362407222787Rickettsia rickettsii str. Hino chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0789
NC_009882:232400:2377552377552405412787Rickettsia rickettsii str. 'Sheila Smith', complete genome2-oxoglutarate dehydrogenase e1 component0789
NC_007940:1178000:1185616118561611883992784Rickettsia bellii RML369-C, complete genome2-oxoglutarate dehydrogenase E1 component0788
NC_016930:228000:2357852357852385712787Rickettsia philipii str. 364D chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0787
NC_017058:1200500:1210964121096412137502787Rickettsia australis str. Cutlack chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0782
NC_014774:671695:6860986860986890012904Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completealpha-ketoglutarate decarboxylase0777
NC_017057:205771:2142242142242170342811Rickettsia prowazekii str. RpGvF24 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0775
NC_017048:547712:5561655561655589752811Rickettsia prowazekii str. GvV257 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0775
NC_000963:205546:2139972139972168072811Rickettsia prowazekii str. Madrid E, complete genome2-OXOGLUTARATE DEHYDROGENASE E1 COMPONENT (sucA)0773
NC_017049:203748:2121992121992150092811Rickettsia prowazekii str. Chernikova chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0773
NC_017050:205547:2139982139982168082811Rickettsia prowazekii str. Katsinyian chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0773
NC_017051:203752:2122032122032150132811Rickettsia prowazekii str. Dachau chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0773
NC_017056:205558:2140092140092168192811Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0773
NC_007797:914500:9176329176329203492718Anaplasma phagocytophilum HZ, complete genome2-oxoglutarate dehydrogenase, E1 component0759
NC_008578:591357:6168766168766205773702Acidothermus cellulolyticus 11B, complete genome2-oxoglutarate dehydrogenase, E1 subunit0756
NC_016109:6640000:6640613664061366443083696Kitasatospora setae KM-6054, complete genomeputative 2-oxoglutarate dehydrogenase E1 component0741
NC_009488:1430693:1449974144997414528652892Orientia tsutsugamushi str. Boryong, complete genome2-oxoglutarate dehydrogenase E10740
NC_010814:1739706:1739706173970617424112706Geobacter lovleyi SZ, complete genome2-oxoglutarate dehydrogenase, E1 subunit0731
NC_014483:1431352:1448526144852614514112886Paenibacillus polymyxa E681 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase)0679
NC_006510:1014500:1048979104897910518312853Geobacillus kaustophilus HTA426, complete genome2-oxoglutarate dehydrogenase complex E1 component0666
NC_016593:1092812:1116058111605811189402883Geobacillus thermoleovorans CCB_US3_UF5 chromosome, complete2-oxoglutarate dehydrogenase E1 component0666
NC_012483:30784:7313173131757072577Acidobacterium capsulatum ATCC 51196, complete genome2-oxoglutarate dehydrogenase, E1 component0657
NC_011773:1277606:1277606127760612804732868Bacillus cereus AH820 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0654
NC_016779:1189405:1201370120137012042372868Bacillus cereus F837/76 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component0654
NC_014963:767034:7670347670347695652532Terriglobus saanensis SP1PR4 chromosome, complete genome2-oxoglutarate dehydrogenase, E1 subunit0649
NC_003296:1696958:1714557171455717172022646Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE 2-OXOGLUTARATE DEHYDROGENASE E1 DECARBOXYLASE COMPONENT OXIDOREDUCTASE PROTEIN0638
NC_017439:45953:6104961049637602712Chlamydia trachomatis E/150 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component1e-164580
NC_015744:367142:3829433829433856542712Chlamydia trachomatis L2c chromosome, complete genomeoxoglutarate dehydrogenase (succinyl-transferring), E1 component4e-164579
NC_010287:372000:3832343832343859452712Chlamydia trachomatis 434/Bu, complete genome2-oxoglutarate dehydrogenase E1 component4e-164579
NC_017429:45965:6094660946636632718Chlamydia trachomatis G/9768 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component2e-163577
NC_017430:49052:6103161031637482718Chlamydia trachomatis G/11222 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component2e-163577
NC_017432:45965:6094660946636632718Chlamydia trachomatis G/9301 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component2e-163577
NC_017440:45965:6094660946636632718Chlamydia trachomatis G/11074 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component2e-163577
NC_017437:49643:6149761497642082712Chlamydia trachomatis A2497 chromosome, complete genome2-oxoglutarate dehydrogenase E1 component3e-163576
NC_016798:49643:6149761497642082712Chlamydia trachomatis A2497, complete genome2-oxoglutarate dehydrogenase E1 component3e-163576
NC_012687:49640:6149461494642052712Chlamydia trachomatis B/TZ1A828/OT chromosome, complete genome2-oxoglutarate dehydrogenase E1 component3e-163576
NC_012686:49643:6156061560642712712Chlamydia trachomatis B/Jali20/OT chromosome, complete genome2-oxoglutarate dehydrogenase E1 component3e-163576
NC_007429:49647:6160961609643202712Chlamydia trachomatis A/HAR-13, complete genome2-oxoglutarate dehydrogenase E1 component3e-163576