Pre_GI: BLASTP Hits

Some Help

Query: NC_011080:780850:788628 Salmonella enterica subsp. enterica serovar Newport str. SL254,

Start: 788628, End: 789779, Length: 1152

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. Antimicrobial resistance (Newport MDR-AmpC) is particularly problematic in this serotype, and the prevalence of Newport MDR-AmpC isolates from humans in the United States has increased from 0% during 1996-1997 to 26% in 2001. MDR strains have been recorded as resistant to ampicillin, chloramphenicol, streptomycin, sulphonamides and tetracycline (ACSSuT) and many of these strains show intermediate or full resistance to third-generation cephalosporins, kanamycin, potentiated sulphonamides, and gentamicin. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2085241:2100560210056021017381179Salmonella enterica subsp. enterica serovar Paratyphi A strUDP-galactopyranose mutase0808
NC_006511:2090058:2105377210537721065551179Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCUDP-galactopyranose mutase0808
NC_011094:842038:8498178498178509681152Salmonella enterica subsp. enterica serovar Schwarzengrund strUDP-galactopyranose mutase0807
NC_003197:776238:7840177840177851681152Salmonella typhimurium LT2, complete genomeputative UDP-galactopyranose mutase0805
NC_016856:776735:7845147845147856651152Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative UDP-galactopyranose mutase0805
NC_016860:816000:8228478228478239981152Salmonella enterica subsp. enterica serovar Typhimurium strUDP-galactopyranose mutase0805
NC_016863:776734:7845137845137856641152Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative UDP-galactopyranose mutase0805
NC_011083:824659:8324278324278335781152Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,UDP-galactopyranose mutase0805
NC_004631:2205821:2220752222075222218461095Salmonella enterica subsp. enterica serovar Typhi Ty2, completeUDP-galactopyranose mutase0709
NC_003198:751779:7592497592497603431095Salmonella enterica subsp. enterica serovar Typhi str. CT18,UDP-galactopyranose mutase0709
NC_016832:2201860:2217517221751722185841068Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,UDP-galactopyranose mutase0708
NC_010102:2322866:233891923389192339914996Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein0702
NC_012731:3500545:3514002351400235151561155Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative UDP-galactopyranose mutase0642
NC_016612:5391706:5400080540008054012341155Klebsiella oxytoca KCTC 1686 chromosome, complete genomeUDP-galactopyranose mutase3e-180631
NC_010498:2278306:2286363228636322875171155Escherichia coli SMS-3-5, complete genomeUDP-galactopyranose mutase5e-178624
NC_021066:460292:5018415018415029951155Raoultella ornithinolytica B6, complete genomeUDP-galactopyranose mutase3e-178624
NC_015061:1902251:1917016191701619181701155Rahnella sp. Y9602 chromosome, complete genomeUDP-galactopyranose mutase3e-169595
NC_013971:2297777:2307753230775323089071155Erwinia amylovora ATCC 49946 chromosome, complete genomeUDP-galactopyranose mutase4e-164577
NC_013961:2260250:2270226227022622713801155Erwinia amylovora, complete genomeUDP-galactopyranose mutase4e-164577
NC_010694:1502019:1517208151720815183621155Erwinia tasmaniensis, complete genomeUDP-galactopyranose mutase3e-161568
NC_012214:1588573:1615735161573516168891155Erwinia pyrifoliae Ep1/96, complete genomeUDP-galactopyranose mutase7e-160563
NC_016845:3536886:354750635475063548456951Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative UDP-galactopyranose mutase5e-146517
NC_014532:3036109:3048977304897730501371161Halomonas elongata DSM 2581, complete genomeUDP-galactopyranose mutase1e-144513
NC_009430:16500:2718827188283391152Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA02, completehypothetical protein9e-142503
NC_009053:1668500:1679666167966616808141149Actinobacillus pleuropneumoniae L20, complete genomeputative UDP-galactopyranose mutase4e-141501
NC_012913:626449:6396436396436407941152Aggregatibacter aphrophilus NJ8700, complete genomeUDP-galactopyranose mutase1e-140499
NC_018691:1864796:1880995188099518821431149Alcanivorax dieselolei B5 chromosome, complete genomeUDP-galactopyranose mutase4e-140498
NC_013421:3279499:3286839328683932879841146Pectobacterium wasabiae WPP163, complete genomeUDP-galactopyranose mutase2e-139495
NC_014121:3399685:3412185341218534133301146Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeUDP-galactopyranose mutase2e-138492
NC_011989:2549252:2562124256212425632271104Agrobacterium vitis S4 chromosome 1, complete sequenceUDP-galactopyranose mutase2e-137489
NC_020063:1659795:1677276167727616784211146Enterobacteriaceae bacterium strain FGI 57, complete genomeUDP-galactopyranose mutase7e-137487
NC_011000:3514338:3541085354108535422361152Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative UDP-galactopyranose mutase1e-135483
NC_009792:714953:7287357287357298831149Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-135481
NC_009446:351042:3685573685573697021146Dichelobacter nodosus VCS1703A, complete genomeUDP-galactopyranose mutase6e-134477
NC_014722:2260489:2268660226866022698111152Burkholderia rhizoxinica HKI 454, complete genomeUDP-galactopyranose mutase7e-133474
NC_012880:1765920:1838952183895218401031152Dickeya dadantii Ech703, complete genomeUDP-galactopyranose mutase1e-129463
NC_006677:1596560:1629345162934516304931149Gluconobacter oxydans 621H, complete genomeUDP-galactopyranose mutase3e-124445
NC_017262:623351:6365146365146376591146Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeUDP-galactopyranose mutase7e-115414
NC_013174:2712000:2717789271778927189341146Jonesia denitrificans DSM 20603, complete genomeUDP-galactopyranose mutase3e-87322
NC_013530:2819569:2821536282153628227231188Xylanimonas cellulosilytica DSM 15894, complete genomeUDP-galactopyranose mutase4e-86318
NC_017218:2119964:2121885212188521230811197Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeUDP-galactopyranose mutase2e-85316
NC_015145:2693749:2722910272291027241391230Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeUDP-galactopyranose mutase3e-85315
NC_014656:1829336:1860917186091718621131197Bifidobacterium longum subsp. longum BBMN68 chromosome, completeglf1e-84313
NC_015067:2136048:2143130214313021443411212Bifidobacterium longum subsp. longum JCM 1217, complete genomeUDP-galactopyranose mutase4e-84311
NC_008525:606986:6291556291556302731119Pediococcus pentosaceus ATCC 25745, complete genomeUDP-galactopyranose mutase1e-83310
NC_015052:2181514:2186819218681921879971179Bifidobacterium longum subsp. infantis 157F, complete genomeUDP-galactopyranose mutase2e-83310
NC_013198:2088780:2103387210338721045051119Lactobacillus rhamnosus GG, complete genomeUDP-galactopyranose mutase glf (UDP-galP mutase)2e-83309
NC_010168:1373337:1387898138789813890821185Renibacterium salmoninarum ATCC 33209 chromosome, complete genomeUDP-galactopyranose mutase3e-83309
NC_011593:2650156:2650156265015626513461191Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,UDP-galactopyranose mutase5e-83308
NC_017219:2646157:2646157264615726473471191Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative UDP-galactopyranose mutase5e-83308
NC_008054:1649160:1672198167219816733131116Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIJ, UDP-galactopyranose mutase2e-82306
NC_014727:1832144:1846213184621318473281116Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,udp-galactopyranose mutase glf2e-82306
NC_008529:1634403:1649399164939916505141116Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeUDP-galactopyranose mutase4e-82305
NC_008054:1617544:1634136163413616352511116Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeEpsIIE, UDP-galactopyranose mutase4e-82305
NC_014727:1877764:1890729189072918918441116Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,udp-galactopyranose mutase glf9e-82304
NC_012814:1757753:1772075177207517732591185Bifidobacterium animalis subsp. lactis Bl-04, complete genomeUDP-galactopyranose mutase7e-81301
NC_012815:1757992:1771847177184717730311185Bifidobacterium animalis subsp. lactis DSM 10140, complete genomeUDP-galactopyranose mutase7e-81301
NC_018704:2417902:2429956242995624310591104Amphibacillus xylanus NBRC 15112, complete genomeUDP-galactopyranose mutase2e-80299
NC_013740:842841:8487658487658498861122Acidaminococcus fermentans DSM 20731, complete genomeUDP-galactopyranose mutase3e-80299
NC_004567:1066710:1073182107318210743031122Lactobacillus plantarum WCFS1, complete genomeUDP-galactopyranose mutase1e-79297
NC_013093:125363:1382001382001393841185Actinosynnema mirum DSM 43827, complete genomeUDP-galactopyranose mutase1e-79297
NC_013235:4618908:4622369462236946235681200Nakamurella multipartita DSM 44233, complete genomeUDP-galactopyranose mutase1e-79296
NC_014554:1019730:1027708102770810288261119Lactobacillus plantarum subsp. plantarum ST-III chromosome,UDP-galactopyranose mutase1e-79296
NC_016786:2235731:2235731223573122368941164Corynebacterium diphtheriae HC01 chromosome, complete genomeUDP-galactopyranose mutase6e-79294
NC_016782:2235000:2235132223513222362951164Corynebacterium diphtheriae 241 chromosome, complete genomeUDP-galactopyranose mutase6e-79294
NC_010610:1580483:1606040160604016071611122Lactobacillus fermentum IFO 3956, complete genomeUDP-galactopyranose mutase8e-79294
NC_012781:2608840:2631215263121526323301116Eubacterium rectale ATCC 33656, complete genomeUDP-galactopyranose mutase2e-78293
NC_008618:200017:2163062163062174841179Bifidobacterium adolescentis ATCC 15703, complete genomeprobable UDP-galactopyranose mutase2e-78292
NC_009655:866281:8822168822168833191104Actinobacillus succinogenes 130Z chromosome, complete genomeUDP-galactopyranose mutase8e-78291
NC_011916:467106:4779214779214790331113Caulobacter crescentus NA1000 chromosome, complete genomeUDP-galactopyranose mutase5e-78291
NC_006300:600516:6134046134046145071104Mannheimia succiniciproducens MBEL55E, complete genomeGlf protein4e-77288
NC_004567:1089231:1108611110861111097441134Lactobacillus plantarum WCFS1, complete genomeUDP-galactopyranose mutase5e-77288
NC_012778:137064:1558011558011569821182Eubacterium eligens ATCC 27750, complete genomeUDP-galactopyranose mutase5e-77288
NC_010278:1625695:1641131164113116422281098Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,UDP-galactopyranose mutase6e-77288
NC_015500:311845:3273143273143284261113Treponema brennaborense DSM 12168 chromosome, complete genomeUDP-galactopyranose mutase7e-77288
NC_009699:2875386:2882060288206028831601101Clostridium botulinum F str. Langeland chromosome, complete genomeUDP-galactopyranose mutase2e-76286
NC_013410:1203937:1225810122581012269341125Fibrobacter succinogenes subsp. succinogenes S85 chromosome,UDP-galactopyranose mutase6e-76284
NC_016077:998741:1026002102600210270991098Acidaminococcus intestini RyC-MR95 chromosome, complete genomeUDP-galactopyranose mutase6e-73275
NC_012759:1983975:1997733199773319988361104Escherichia coli BW2952 chromosome, complete genomeUDP-galactopyranose mutase, FAD/NAD(P)-binding7e-73274
NC_000913:2092559:2105250210525021063531104Escherichia coli K12, complete genomeUDP-galactopyranose mutase, FAD/NAD(P)-binding7e-73274
NC_010473:2183567:2196258219625821973611104Escherichia coli str. K-12 substr. DH10B, complete genomeUDP-galactopyranose mutase, FAD/NAD(P)-binding7e-73274
AC_000091:2096672:2109363210936321104661104Escherichia coli W3110 DNA, complete genomeUDP-galactopyranose mutase, FAD/NAD(P)-binding7e-73274
NC_007947:1229807:1245080124508012462191140Methylobacillus flagellatus KT, complete genomeUDP-galactopyranose mutase1e-72273
NC_002163:1354215:1377339137733913784451107Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeUDP-galactopyranose mutase2e-72272
NC_015578:1633393:1658073165807316591881116Treponema primitia ZAS-2 chromosome, complete genomeUDP-galactopyranose mutase4e-71268
NC_004578:3241618:3261307326130732624881182Pseudomonas syringae pv. tomato str. DC3000, complete genomeUDP-galactopyranose mutase3e-70265
NC_014802:1392831:1404280140428014054131134Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeUDP-galactopyranose mutase4e-69262
NC_015064:1021483:1023260102326010257522493Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUDP-galactopyranose mutase2e-68259
NC_011884:1898702:1913560191356019160042445Cyanothece sp. PCC 7425, complete genomeUDP-galactopyranose mutase3e-68259
NC_017068:1852708:1902612190261219037151104Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative UDP-galactopyranose mutase Glf5e-68258
NC_017068:2436960:2444475244447524455691095Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative UDP-galactopyranose mutase1e-67256
NC_014119:977136:9848499848499859371089Burkholderia sp. CCGE1002 chromosome chromosome 3, completeUDP-galactopyranose mutase8e-67254
NC_018645:2492779:2496079249607924971791101Desulfobacula toluolica Tol2, complete genomeUDP-galactopyranose mutase RfbD6e-66251
NC_006510:3321426:3362398336239833635461149Geobacillus kaustophilus HTA426, complete genomeUDP-galactopyranose mutase1e-65250
NC_010681:934374:9509549509549520451092Burkholderia phytofirmans PsJN chromosome 1, complete sequenceUDP-galactopyranose mutase1e-65250
NC_017272:607900:6190526190526201701119Thermus thermophilus SG0.5JP17-16 chromosome, complete genomeUDP-galactopyranose mutase2e-65249
NC_015596:1556007:1575895157589515770011107Sinorhizobium meliloti AK83 chromosome 2, complete sequenceUDP-galactopyranose mutase5e-65248
NC_014212:2776457:2789120278912027902411122Meiothermus silvanus DSM 9946 chromosome, complete genomeUDP-galactopyranose mutase5e-64245
NC_014033:1808782:1821472182147218226021131Prevotella ruminicola 23 chromosome, complete genomeUDP-galactopyranose mutase5e-64245
NC_014974:246404:2522902522902534111122Thermus scotoductus SA-01 chromosome, complete genomeUDP-galactopyranose mutase6e-64244
NC_013411:3251500:3262524326252432636841161Geobacillus sp. Y412MC61, complete genomeUDP-galactopyranose mutase1e-63243
NC_014915:3259440:3268493326849332696531161Geobacillus sp. Y412MC52 chromosome, complete genomeUDP-galactopyranose mutase1e-63243
NC_015185:1352171:1354841135484113559891149Desulfurobacterium thermolithotrophum DSM 11699 chromosome,UDP-galactopyranose mutase2e-58226
NC_014802:1392831:1396241139624113973711131Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completeUDP-galactopyranose mutase7e-58224
NC_013946:2050871:2063660206366020647871128Meiothermus ruber DSM 1279 chromosome, complete genomeUDP-galactopyranose mutase2e-57223
NC_015977:2565922:2584675258467525858711197Roseburia hominis A2-183 chromosome, complete genomeUDP-galactopyranose mutase3e-56219
NC_014122:1313303:1325183132518313263821200Methanocaldococcus infernus ME chromosome, complete genomeUDP-galactopyranose mutase1e-53210
NC_014364:667841:6937556937556949121158Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeUDP-galactopyranose mutase6e-52205
NC_000908:160072:1623771623771635911215Mycoplasma genitalium G37, complete genomeUDP-galactopyranose mutase4e-41169
NC_020291:4944835:494873149487314948928198Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeUDP-galactopyranose mutase5e-0652.4
NC_004193:1335626:1336825133682513382821458Oceanobacillus iheyensis HTE831, complete genomeL-amino acid oxidase6e-0652.4