Pre_GI: BLASTP Hits

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Query: NC_011080:1944226:1977428 Salmonella enterica subsp. enterica serovar Newport str. SL254,

Start: 1977428, End: 1979479, Length: 2052

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. Antimicrobial resistance (Newport MDR-AmpC) is particularly problematic in this serotype, and the prevalence of Newport MDR-AmpC isolates from humans in the United States has increased from 0% during 1996-1997 to 26% in 2001. MDR strains have been recorded as resistant to ampicillin, chloramphenicol, streptomycin, sulphonamides and tetracycline (ACSSuT) and many of these strains show intermediate or full resistance to third-generation cephalosporins, kanamycin, potentiated sulphonamides, and gentamicin. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:1057259:1057259105725910593102052Salmonella enterica subsp. enterica serovar Paratyphi A strprotease 201347
NC_006511:1063249:1063249106324910653002052Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCColigopeptidase01347
NC_011294:1220526:1220526122052612225772052Salmonella enterica subsp. enterica serovar Enteritidis strprotease 201346
NC_011094:1923870:1950368195036819524192052Salmonella enterica subsp. enterica serovar Schwarzengrund strprotease 201346
NC_010102:1137247:1137247113724711392982052Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein01346
NC_003197:1945858:1971805197180519738562052Salmonella typhimurium LT2, complete genomeprotease II01345
NC_011205:1345511:1345511134551113475622052Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853protease 201345
NC_016810:1903426:1929373192937319314242052Salmonella enterica subsp. enterica serovar Typhimurium stroligopeptidase01345
NC_016856:1957263:1983210198321019852612052Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sprotease 201345
NC_016857:1903426:1929373192937319314242052Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protease 201345
NC_016863:1905454:1931401193140119334522052Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1protease 201345
NC_017046:1902788:1928736192873619307872052Salmonella enterica subsp. enterica serovar Typhimurium str. 798oligopeptidase01345
NC_016860:1943203:1967346196734619693972052Salmonella enterica subsp. enterica serovar Typhimurium strprotease 201342
NC_012125:1897611:1897611189761118996622052Salmonella enterica subsp. enterica serovar Paratyphi C strainprotease 201341
NC_008258:1873805:1891272189127218933322061Shigella flexneri 5 str. 8401, complete genomeprotease II01227
NC_016822:1339058:1362308136230813643682061Shigella sonnei 53G, complete genomeprotease 201221
NC_007384:1355060:1379459137945913815192061Shigella sonnei Ss046, complete genomeprotease II01221
NC_013850:1887556:1888339188833918903992061Klebsiella variicola At-22 chromosome, complete genomeOligopeptidase B01127
NC_016816:2073677:2073677207367720757492073Pantoea ananatis LMG 5342, complete genomeprotease II PtrB0956
NC_015566:2039431:2039431203943120414642034Serratia sp. AS12 chromosome, complete genomeOligopeptidase B0886
NC_015567:2039443:2039443203944320414762034Serratia sp. AS9 chromosome, complete genomeOligopeptidase B0886
NC_010159:1668795:1681761168176116838122052Yersinia pestis Angola, complete genomeprotease II0878
NC_010634:2004653:2007624200762420096752052Yersinia pseudotuberculosis PB1/+, complete genomepeptidase S9 prolyl oligopeptidase0877
NC_015061:3111211:3133925313392531359642040Rahnella sp. Y9602 chromosome, complete genomeOligopeptidase B0862
NC_013421:2306000:2311101231110123131522052Pectobacterium wasabiae WPP163, complete genomeOligopeptidase B0862
NC_012912:2553391:2565838256583825678892052Dickeya zeae Ech1591, complete genomeOligopeptidase B0823
NC_015914:621411:6240896240896261762088Cyclobacterium marinum DSM 745 chromosome, complete genomepeptidase S9A prolyl oligopeptidase domain-containing protein beta-propeller3e-161569
NC_013222:817686:8513938513938535342142Robiginitalea biformata HTCC2501, complete genomeProtease II5e-160565
NC_010501:4311873:4325573432557343276152043Pseudomonas putida W619, complete genomeOligopeptidase B1e-120434
NC_010793:1075388:1097935109793510999952061Orientia tsutsugamushi str. Ikeda, complete genomeprotease II2e-114413
NC_009488:327285:3441343441343461882055Orientia tsutsugamushi str. Boryong, complete genomeoligopeptidase B1e-113410
NC_007925:1448726:1448726144872614508792154Rhodopseudomonas palustris BisB18, complete genomeOligopeptidase B1e-111404
NC_020911:1776670:1800761180076118028692109Octadecabacter antarcticus 307, complete genomeprotease II4e-109395
NC_009879:860925:8609258609258629792055Rickettsia canadensis str. McKiel, complete genomeProtease II1e-108394
NC_016929:851044:8510448510448530982055Rickettsia canadensis str. CA410 chromosome, complete genomeprotease II5e-108392
NC_002677:2642860:2642860264286026450342175Mycobacterium leprae TN, complete genomeprotease II9e-108391
NC_012982:1282856:1282856128285612849942139Hirschia baltica ATCC 49814, complete genomeOligopeptidase B3e-107389
NC_016642:2573481:2578333257833325804262094Pseudovibrio sp. FO-BEG1 chromosome, complete genomeprotease 2/Oligopeptidase B1e-106387
NC_002678:4885790:4924742492474249268592118Mesorhizobium loti MAFF303099, complete genomedipeptidyl aminopeptidase1e-67258
NC_015067:459626:4903104903104928262517Bifidobacterium longum subsp. longum JCM 1217, complete genomeprotease1e-58228
NC_014169:515957:5378785378785401482271Bifidobacterium longum subsp. longum JDM301 chromosome, completeoligopeptidase B2e-58227
NC_020126:2883194:2899969289996929020382070Myxococcus stipitatus DSM 14675, complete genomeprolyl oligopeptidase2e-49197
NC_014501:5775547:5775547577554757776282082Cyanothece sp. PCC 7822 chromosome, complete genomeProlyl oligopeptidase3e-45183
NC_011729:812594:8314938314938335592067Cyanothece sp. PCC 7424 chromosome, complete genomeprolyl oligopeptidase5e-44179
NC_007512:865500:8945118945118967122202Pelodictyon luteolum DSM 273, complete genomeProlyl oligopeptidase2e-40167
NC_011027:760221:7712647712647734412178Chlorobaculum parvum NCIB 8327, complete genomeProlyl oligopeptidase9e-40165
NC_013730:2558999:2591158259115825933202163Spirosoma linguale DSM 74, complete genome2e-39164
NC_009337:1200722:1202443120244312046412199Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeprolyl oligopeptidase2e-35151
NC_013595:4758034:4760696476069647628132118Streptosporangium roseum DSM 43021, complete genomeProlyl oligopeptidase7e-35149
NC_012470:580373:5928725928725948181947Streptococcus equi subsp. zooepidemicus, complete genomeprolyl oligopeptidase family protein8e-26119
NC_010524:4402478:4426402442640244285102109Leptothrix cholodnii SP-6, complete genomeProlyl oligopeptidase1e-25118
NC_006624:324267:3485733485733504231851Thermococcus kodakarensis KOD1, complete genomeprolyl endopeptidase1e-22108
NC_015566:2328771:2330719233071923328812163Serratia sp. AS12 chromosome, complete genomeProlyl oligopeptidase4e-22107
NC_015567:2328782:2330730233073023328922163Serratia sp. AS9 chromosome, complete genomeProlyl oligopeptidase4e-22107
NC_013131:8480384:8522720852272085248492130Catenulispora acidiphila DSM 44928, complete genomeProlyl oligopeptidase3e-22107
NC_019673:1384795:1402726140272614049962271Saccharothrix espanaensis DSM 44229 complete genomeProlyl oligopeptidase2e-22107
NC_010645:3720501:3720501372050137225942094Bordetella avium 197N, complete genomeprolyl endopeptidase1e-21105
NC_000963:205546:2055462055462077142169Rickettsia prowazekii str. Madrid E, complete genomePROBABLE PEPTIDASE Y4NA (ppcE)1e-20102
NC_017048:547712:5477125477125498802169Rickettsia prowazekii str. GvV257 chromosome, complete genomepeptidase1e-20102
NC_017049:203748:2037482037482059162169Rickettsia prowazekii str. Chernikova chromosome, complete genomepeptidase1e-20102
NC_017050:205547:2055472055472077152169Rickettsia prowazekii str. Katsinyian chromosome, complete genomepeptidase1e-20102
NC_017051:203752:2037522037522059202169Rickettsia prowazekii str. Dachau chromosome, complete genomepeptidase1e-20102
NC_017056:205558:2055582055582077262169Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomepeptidase1e-20102
NC_017057:205771:2057712057712079392169Rickettsia prowazekii str. RpGvF24 chromosome, complete genomepeptidase1e-20102
NC_009921:6691089:6720875672087567229322058Frankia sp. EAN1pec, complete genomeProlyl oligopeptidase3e-1997.4
NC_004369:371109:3856223856223876762055Corynebacterium efficiens YS-314, complete genomeputative peptidase3e-1894.4
NC_015675:6423000:6423513642351364256422130Mesorhizobium opportunistum WSM2075 chromosome, complete genomeProlyl oligopeptidase4e-1170.5
NC_014923:5868000:5868842586884258709712130Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeProlyl oligopeptidase4e-1170.5
NC_019973:5797000:5797802579780257999312130Mesorhizobium australicum WSM2073, complete genomeserine protease, S9A family peptidase4e-1170.5
NC_011894:7421867:7443512744351274455872076Methylobacterium nodulans ORS 2060, complete genomepeptidase S9 prolyl oligopeptidase active site domain protein9e-1169.3