Pre_GI: BLASTP Hits

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Query: NC_011080:1709612:1731790 Salmonella enterica subsp. enterica serovar Newport str. SL254,

Start: 1731790, End: 1732395, Length: 606

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. Antimicrobial resistance (Newport MDR-AmpC) is particularly problematic in this serotype, and the prevalence of Newport MDR-AmpC isolates from humans in the United States has increased from 0% during 1996-1997 to 26% in 2001. MDR strains have been recorded as resistant to ampicillin, chloramphenicol, streptomycin, sulphonamides and tetracycline (ACSSuT) and many of these strains show intermediate or full resistance to third-generation cephalosporins, kanamycin, potentiated sulphonamides, and gentamicin. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:1599000:161848116184811619086606Salmonella bongori NCTC 12419, complete genomeACP phosphodiesterase9e-106382
NC_011083:1761352:178354017835401784145606Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,fmn-dependent NADH-azoreductase2e-105380
NC_003197:1713259:173543717354371736042606Salmonella typhimurium LT2, complete genomeacyl carrier protein phosphodiesterase2e-105380
NC_004631:1587000:160292516029251603530606Salmonella enterica subsp. enterica serovar Typhi Ty2, completeacyl carrier protein phosphodiesterase2e-105380
NC_011094:1683979:170617717061771706782606Salmonella enterica subsp. enterica serovar Schwarzengrund strazoreductase2e-105380
NC_016810:1670112:169229016922901692895606Salmonella enterica subsp. enterica serovar Typhimurium strAcyl carrier protein phosphodiesterase2e-105380
NC_016831:1468691:149087214908721491477606Salmonella enterica subsp. enterica serovar Gallinarum/pullorumacyl carrier protein phosphodiesterase2e-105380
NC_016832:1582273:159987515998751600480606Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,FMN-dependent NADH-azoreductase2e-105380
NC_016856:1723236:174541417454141746019606Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sazoreductase2e-105380
NC_016857:1670112:169229016922901692895606Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74azoreductase2e-105380
NC_016860:1710950:173312817331281733733606Salmonella enterica subsp. enterica serovar Typhimurium strazoreductase2e-105380
NC_016863:1671428:169360616936061694211606Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1azoreductase2e-105380
NC_017046:1669995:169217316921731692778606Salmonella enterica subsp. enterica serovar Typhimurium str. 798Acyl carrier protein phosphodiesterase2e-105380
NC_011149:1429523:147111014711101471715606Salmonella enterica subsp. enterica serovar Agona str. SL483,fmn-dependent NADH-azoreductase5e-105379
NC_006905:1726416:174859317485931749198606Salmonella enterica subsp. enterica serovar Choleraesuis stracyl carrier protein phosphodiesterase3e-104377
NC_013892:2332319:235222723522272352841615Xenorhabdus bovienii SS-2004 chromosome, complete genomeNADH-azoreductase, FMN-dependent3e-77287
NC_011001:372185:396236396236396835600Burkholderia cenocepacia J2315 chromosome 2, complete sequenceFMN-dependent NADH-azoreductase2e-50198
NC_009512:1518113:152276815227681523382615Pseudomonas putida F1, complete genomeNAD(P)H dehydrogenase (quinone)5e-48190
NC_008570:4009762:401608340160834016682600Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeacyl carrier protein phosphodiesterase2e-45181
NC_008543:127675:134130134130134774645Burkholderia cenocepacia HI2424 chromosome 2, complete sequence(Acyl-carrier-protein) phosphodiesterase6e-34143
NC_008061:2106848:213499721349972135641645Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence(Acyl-carrier protein) phosphodiesterase6e-34143
NC_016010:1822212:182542318254231826007585Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeacyl carrier protein phosphodiesterase7e-33140
NC_014817:142976:165222165222165833612Asticcacaulis excentricus CB 48 chromosome 2, complete sequencenad(p)h dehydrogenase (quinone)1e-31136
NC_011071:2207385:220738522073852207993609Stenotrophomonas maltophilia R551-3, complete genomeNAD(P)H dehydrogenase (quinone)2e-31135
NC_014500:3744705:374503737450373745660624Dickeya dadantii 3937 chromosome, complete genomeFMN-dependent NADH-azoreductase2e-30132
NC_012917:3378759:337908533790853379714630Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeNAD(P)H dehydrogenase (quinone)4e-30131
NC_015381:2859000:288756328875632888171609Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative acyl carrier protein phosphodiesterase6e-30130
NC_020211:4598217:461718646171864617794609Serratia marcescens WW4, complete genomeputative acyl carrier protein phosphodiesterase9e-30129
NC_012587:1203103:121943612194361220056621Rhizobium sp. NGR234, complete genomeputative acyl carrier protein phosphodiesterase1e-27122
NC_011894:6731115:673155967315596732176618Methylobacterium nodulans ORS 2060, complete genomeNAD(P)H dehydrogenase (quinone)7e-27120
NC_014963:3942363:394842039484203949037618Terriglobus saanensis SP1PR4 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)1e-26119
NC_009254:442360:454429454429455046618Burkholderia vietnamiensis G4 chromosome 3, complete sequenceACP phosphodiesterase3e-26118
NC_015376:3320818:334263333426333343250618Burkholderia gladioli BSR3 chromosome chromosome 2, completeAcyl-carrier-protein phosphodiesterase1e-24113
NC_015064:2421034:244853324485332449156624Acidobacterium sp. MP5ACTX9 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-24112
NC_016023:915178:934716934716935339624Bacillus coagulans 36D1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)2e-24112
NC_017506:1507943:151523515152351515954720Marinobacter adhaerens HP15 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-24111
NC_015634:359500:410833410833411453621Bacillus coagulans 2-6 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-24111
NC_015379:4630367:464776746477674648387621Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,FMN-dependent NADH-azoreductase1e-23109
NC_009439:3485000:350087935008793501580702Pseudomonas mendocina ymp, complete genomeNAD(P)H dehydrogenase (quinone)6e-23107
NC_007802:1991211:202354020235402024154615Jannaschia sp. CCS1, complete genome(Acyl-carrier protein) phosphodiesterase1e-22106
NC_020409:437781:448651448651449265615Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFMN-dependent NADH-azoreductase2e-21102
NC_006512:1722138:172615117261511726873723Idiomarina loihiensis L2TR, complete genomeAcyl carrier protein phosphodiesterase2e-21102
NC_010125:3854957:385842438584243859029606Gluconacetobacter diazotrophicus PAl 5, complete genomeputative acyl carrier protein phosphodiesterase6e-21100
NC_004129:2440744:244387624438762444496621Pseudomonas fluorescens Pf-5, complete genomeacyl carrier protein phosphodiesterase, putative7e-21100
NC_015410:3791500:381222438122243812925702Pseudomonas mendocina NK-01 chromosome, complete genomeNAD(P)H dehydrogenase8e-21100
NC_007509:1043602:105875810587581059390633Burkholderia sp. 383 chromosome 3, complete sequenceAcyl-carrier protein phosphodiesterase2e-2099.4
NC_018000:2543500:254849425484942549129636Sinorhizobium fredii USDA 257 chromosome, complete genomeFMN-dependent NADH-azoreductase 93e-2098.2
NC_015690:6521740:652908865290886529720633Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAzoR8e-2096.7
NC_012997:2254000:227734622773462278050705Teredinibacter turnerae T7901, complete genomeFMN-dependent NADH-azoreductase 26e-1994
NC_015379:4282815:428599542859954286639645Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,FMN-dependent NADH-azoreductase3e-1891.7
NC_010814:1441327:148777014877701488402633Geobacter lovleyi SZ, complete genomeNAD(P)H dehydrogenase (quinone)5e-1890.9
NC_016605:50695:543415434154973633Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeNADPH-dependent FMN reductase family protein6e-1890.9
NC_015740:1594376:159853115985311599250720Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeNAD(P)H dehydrogenase (quinone)2e-1789.4
NC_014652:1803000:180302218030221803627606Caldicellulosiruptor hydrothermalis 108 chromosome, completenad(p)h dehydrogenase (quinone)3e-1788.6
NC_018691:896464:918248918248918943696Alcanivorax dieselolei B5 chromosome, complete genomeNAD(P)H dehydrogenase (Quinone)5e-1787.4
NC_008752:725189:758852758852759568717Acidovorax avenae subsp. citrulli AAC00-1, complete genome(Acyl-carrier-protein) phosphodiesterase5e-1787.4
NC_017191:467207:485052485052485702651Bacillus amyloliquefaciens XH7 chromosome, complete genomeFMN-dependent NADH-azoreductase 11e-1686.3
NC_017188:461177:479030479030479680651Bacillus amyloliquefaciens TA208 chromosome, complete genomeFMN-dependent NADH-azoreductase 11e-1686.3
NC_013929:5097389:509786750978675098520654Streptomyces scabiei 87.22 chromosome, complete genomedehydrogenase flavoprotein2e-1685.9
NC_016114:3711000:371791037179103718521612Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)3e-1685.1
NC_017190:466236:477302477302477952651Bacillus amyloliquefaciens LL3 chromosome, complete genomeacyl carrier protein phosphodiesterase 3; NAD(P)H dehydrogenase5e-1684.3
NC_014551:483773:491378491378492028651Bacillus amyloliquefaciens DSM 7, complete genomeacyl carrier protein phosphodiesterase 3; NAD(P)H dehydrogenase5e-1684.3
NC_020272:20435:268882688827529642Bacillus amyloliquefaciens IT-45, complete genomeNAD(P)H dehydrogenase (quinone)5e-1684
NC_011146:2916223:293183329318332932465633Geobacter bemidjiensis Bem, complete genomeNAD(P)H dehydrogenase (quinone)7e-1683.6
NC_009659:1050532:109328210932821093905624Janthinobacterium sp. Marseille chromosome, complete genomeACP phosphodieterase8e-1683.6
NC_003888:32134:368163681637478663Streptomyces coelicolor A3(2), complete genomehydrolase3e-1582
NC_020063:1051310:105661510566151057250636Enterobacteriaceae bacterium strain FGI 57, complete genomeacyl carrier protein phosphodiesterase2e-1582
NC_016642:2440070:246175324617532462421669Pseudovibrio sp. FO-BEG1 chromosome, complete genomeNAD(P)H dehydrogenase (quinone)8e-1580.1
NC_014815:841484:894461894461895108648Micromonospora sp. L5 chromosome, complete genomenad(p)h dehydrogenase (quinone)1e-1376.6
NC_014211:174694:177215177215177916702Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidNAD(P)H dehydrogenase (quinone)1e-1376.3
NC_016628:1:143611436114978618Vibrio furnissii NCTC 11218 chromosome 2, complete sequence(Acyl-carrier-protein) phosphodiesterase/NAD(P)H dehydrogenase (quinone)1e-1376.3
NC_013592:2968500:298930029893002989977678Dickeya dadantii Ech586, complete genomeNAD(P)H dehydrogenase (quinone)1e-1375.9
NC_015589:3085442:309432130943213094949629Desulfotomaculum ruminis DSM 2154 chromosome, complete genome6e-1373.9
NC_004578:6089958:611599361159936116622630Pseudomonas syringae pv. tomato str. DC3000, complete genomeacyl carrier protein phosphodiesterase, putative2e-1168.9
NC_006055:44649:657686576866367600Mesoplasma florum L1, complete genomeacyl carrier protein phosphodiesterase4e-0961.2
NC_015957:5225903:522698452269845227625642Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFMN-dependent NADH-azoreductase6e-0857.4
NC_006055:44649:619536195362552600Mesoplasma florum L1, complete genomeacyl carrier protein phosphodiesterase1e-0756.6
NC_014388:55903:630416304163622582Butyrivibrio proteoclasticus B316 chromosome 2, complete genomeacyl carrier protein phosphodiesterase AcpD5e-0754.3