Pre_GI: BLASTN Hits

Some Help

Query: NC_011035:1974489 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 1974489, End: 2002820, Length: 28332

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008767:84950*8495011280827859Neisseria meningitidis FAM18, complete genome09093BLASTN svgBLASTP svg
NC_003112:96815*9681512483128017Neisseria meningitidis MC58, complete genome08306BLASTN svgBLASTP svg
NC_010120:2055803*2055803208173125929Neisseria meningitidis 053442, complete genome07372BLASTN svgBLASTP svg
NC_003112:14235281423528145518831661Neisseria meningitidis MC58, complete genome01409BLASTN svgBLASTP svg
NC_002946:1935186*1935186195867523490Neisseria gonorrhoeae FA 1090, complete genome3e-136494BLASTN svgBLASTP svg
NC_003116:1488576*1488576150859920024Neisseria meningitidis Z2491, complete genome4e-132480BLASTN svgBLASTP svg
NC_003112:2215184*2215184224803032847Neisseria meningitidis MC58, complete genome2e-112414BLASTN svgBLASTP svg
NC_003116:291661*29166131692925269Neisseria meningitidis Z2491, complete genome8e-112412BLASTN svgBLASTP svg
NC_010120:2098000*2098000212739829399Neisseria meningitidis 053442, complete genome8e-112412BLASTN svgBLASTP svg
NC_008767:2126854*2126854215711130258Neisseria meningitidis FAM18, complete genome5e-110406BLASTN svgBLASTP svg
NC_002946:68472868472870809923372Neisseria gonorrhoeae FA 1090, complete genome1e-107398BLASTN svgBLASTP svg
NC_002946:10201751020175106499344819Neisseria gonorrhoeae FA 1090, complete genome5e-104387BLASTN svgBLASTP svg
NC_014752:197000*19700022735630357Neisseria lactamica ST-640, complete genome1e-88335BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome3e-74287BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome3e-74287BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome3e-74287BLASTN svgBLASTP svg
NC_003112:15940001594000161392219923Neisseria meningitidis MC58, complete genome1e-73285BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome2e-72281BLASTN svgBLASTP svg
NC_010120:144000*14400016559921600Neisseria meningitidis 053442, complete genome8e-72280BLASTN svgBLASTP svg
NC_008767:45198345198348189329911Neisseria meningitidis FAM18, complete genome3e-71278BLASTN svgBLASTP svg
NC_008767:13632881363288138639123104Neisseria meningitidis FAM18, complete genome3e-71278BLASTN svgBLASTP svg
NC_003116:65887965887968269623818Neisseria meningitidis Z2491, complete genome3e-71278BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome1e-70276BLASTN svgBLASTP svg
NC_010120:78800078800081026622267Neisseria meningitidis 053442, complete genome5e-70274BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome7e-69270BLASTN svgBLASTP svg
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome5e-67264BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome5e-67264BLASTN svgBLASTP svg
NC_008767:17393441739344175756118218Neisseria meningitidis FAM18, complete genome2e-66262BLASTN svgBLASTP svg
NC_003116:988000988000101010222103Neisseria meningitidis Z2491, complete genome7e-66260BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome7e-66260BLASTN svgBLASTP svg
NC_014752:131994*13199415436422371Neisseria lactamica ST-640, complete genome3e-65258BLASTN svgBLASTP svg
NC_003112:16853301685330171029124962Neisseria meningitidis MC58, complete genome1e-64256BLASTN svgBLASTP svg
NC_008767:87790487790490209924196Neisseria meningitidis FAM18, complete genome4e-64254BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome3e-62248BLASTN svgBLASTP svg
NC_002946:1902642*1902642192658323942Neisseria gonorrhoeae FA 1090, complete genome4e-61244BLASTN svgBLASTP svg
NC_008767:804655*80465582578721133Neisseria meningitidis FAM18, complete genome7e-60240BLASTN svgBLASTP svg
NC_014752:13916151391615142388832274Neisseria lactamica ST-640, complete genome3e-59238BLASTN svgBLASTP svg
NC_002946:1786000*1786000181482228823Neisseria gonorrhoeae FA 1090, complete genome4e-58234BLASTN svgBLASTP svg
NC_003116:867943*86794389021922277Neisseria meningitidis Z2491, complete genome2e-54222BLASTN svgBLASTP svg
NC_003116:2063500*2063500208368920190Neisseria meningitidis Z2491, complete genome4e-52214BLASTN svgBLASTP svg
NC_002946:1556000*1556000157831222313Neisseria gonorrhoeae FA 1090, complete genome4e-52214BLASTN svgBLASTP svg
NC_010120:662969*66296968275319785Neisseria meningitidis 053442, complete genome1e-51212BLASTN svgBLASTP svg
NC_010120:13135001313500133123817739Neisseria meningitidis 053442, complete genome1e-51212BLASTN svgBLASTP svg
NC_008767:92781092781095056622757Neisseria meningitidis FAM18, complete genome1e-51212BLASTN svgBLASTP svg
NC_003112:719490*71949074286423375Neisseria meningitidis MC58, complete genome1e-51212BLASTN svgBLASTP svg
NC_003112:18241961824196187366149466Neisseria meningitidis MC58, complete genome1e-48202BLASTN svgBLASTP svg
NC_010120:45277145277147660723837Neisseria meningitidis 053442, complete genome9e-47196BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome2e-41178BLASTN svgBLASTP svg
NC_014752:13314471331447135039918953Neisseria lactamica ST-640, complete genome8e-41176BLASTN svgBLASTP svg
NC_003112:603879*60387962713023252Neisseria meningitidis MC58, complete genome1e-39172BLASTN svgBLASTP svg
NC_003116:75566675566677455118886Neisseria meningitidis Z2491, complete genome3e-37165BLASTN svgBLASTP svg
NC_003116:17340001734000175259918600Neisseria meningitidis Z2491, complete genome1e-36163BLASTN svgBLASTP svg
NC_008767:549351*54935156839719047Neisseria meningitidis FAM18, complete genome8e-35157BLASTN svgBLASTP svg
NC_002946:618439*61843964067022232Neisseria gonorrhoeae FA 1090, complete genome3e-34155BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome3e-34155BLASTN svgBLASTP svg
NC_014752:15300001530000155313723138Neisseria lactamica ST-640, complete genome3e-34155BLASTN svgBLASTP svg
NC_010120:2029880*2029880205559925720Neisseria meningitidis 053442, complete genome7e-32147BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome7e-32147BLASTN svgBLASTP svg
NC_003112:36486936486938516520297Neisseria meningitidis MC58, complete genome7e-32147BLASTN svgBLASTP svg
NC_010120:1814592*1814592183677422183Neisseria meningitidis 053442, complete genome3e-28135BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome1e-24123BLASTN svgBLASTP svg
NC_014752:23601*236014343619836Neisseria lactamica ST-640, complete genome7e-23117BLASTN svgBLASTP svg
NC_010120:10658331065833109411728285Neisseria meningitidis 053442, complete genome1e-21113BLASTN svgBLASTP svg
NC_003116:93576*9357612141127836Neisseria meningitidis Z2491, complete genome4e-18101BLASTN svgBLASTP svg
NC_010120:19994219994222285022909Neisseria meningitidis 053442, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_008767:20101402010140202919319054Neisseria meningitidis FAM18, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011992:3615517*3615517363908923573Acidovorax ebreus TPSY, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008767:1829500*1829500185316723668Neisseria meningitidis FAM18, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_015138:5276857*5276857530246825612Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete9e-1073.8BLASTN svgBLASTP svg
NC_013854:2714033*2714033273463520603Azospirillum sp. B510, complete genome8e-0763.9BLASTN svgBLASTP svg