Pre_GI: BLASTP Hits

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Query: NC_011035:968569:980132 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 980132, End: 983158, Length: 3027

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017511:884083:8962218962218992473027Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative type I restriction enzyme01991
NC_002946:684728:6900606900606930863027Neisseria gonorrhoeae FA 1090, complete genomeputative type I restriction enzyme01985
NC_015856:1:5728572888383111Collimonas fungivorans Ter331 chromosome, complete genometype I site-specific deoxyribonuclease01268
NC_018876:2151226:2157605215760521608053201Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-39163
NC_007575:973559:9886579886579917493093Sulfurimonas denitrificans DSM 1251, complete genomeType I site-specific deoxyribonuclease HsdR1e-37159
NC_006672:47610:6310163101663973297Gluconobacter oxydans 621H plasmid pGOX1, complete sequencePutative type I restriction enzyme9e-38159
NC_006270:4149004:4163372416337241664793108Bacillus licheniformis ATCC 14580, complete genomeputative Type I site-specific deoxyribonuclease HsdR2e-37158
NC_006322:4149500:4163487416348741665943108Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-37158
NC_016023:267581:2811592811592842663108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-37157
NC_012108:2194251:2195556219555621985733018Desulfobacterium autotrophicum HRM2, complete genomeHsdR21e-36155
NC_013592:446092:4567674567674600513285Dickeya dadantii Ech586, complete genometype I site-specific deoxyribonuclease, HsdR family1e-36155
NC_016023:1923170:1933430193343019365373108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-36154
NC_013440:3813132:3833374383337438364123039Haliangium ochraceum DSM 14365, complete genometype I site-specific deoxyribonuclease, HsdR family3e-36154
NC_008601:753221:7532217532217563313111Francisella tularensis subsp. novicida U112, complete genometype I restriction-modification system, subunit R (restriction)3e-35150
NC_002937:1764117:1777728177772817810273300Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype I restriction-modification enzyme, R subunit3e-34148
NC_018876:587094:6119046119046148942991Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-34147
NC_018604:2579000:2606937260693726100713135Brachyspira pilosicoli WesB complete genometype I site-specific deoxyribonuclease HsdR5e-34147
NC_021184:1024305:1026603102660310298363234Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family1e-32142
NC_008009:4421992:4435635443563544387243090Acidobacteria bacterium Ellin345, complete genometype I site-specific deoxyribonuclease, HsdR family1e-32142
NC_008346:2579756:2597163259716326003483186Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system, R subunit3e-32140
NC_007651:3064530:3147581314758131507363156Burkholderia thailandensis E264 chromosome I, complete sequencetype I restriction-modification system endonuclease1e-31139
NC_017187:814940:8294958294958326533159Arcobacter butzleri ED-1, complete genomedeoxyribonuclease5e-31137
NC_012793:1718000:1718140171814017211513012Geobacillus sp. WCH70, complete genometype I site-specific deoxyribonuclease, HsdR family7e-31136
NC_007677:1354500:1385496138549613886453150Salinibacter ruber DSM 13855, complete genomeHsdR2e-30135
NC_016642:757964:7579647579647612603297Pseudovibrio sp. FO-BEG1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-30134
NC_021064:793098:8054238054238085783156Propionibacterium avidum 44067, complete genomeHsdR family type I site-specific deoxyribonuclease4e-30134
NC_007086:1457531:1460771146077114640613291Xanthomonas campestris pv. campestris str. 8004, complete genomeHsdR protein1e-29132
NC_003902:3430051:3446731344673134500213291Xanthomonas campestris pv. campestris str. ATCC 33913, completeHsdR protein1e-29132
NC_016620:781995:7969917969918002093219Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme1e-29132
NC_015660:1918307:1939072193907219421373066Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype I site-specific deoxyribonuclease, HsdR family9e-30132
NC_009665:2602000:2619809261980926230003192Shewanella baltica OS185 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-29131
NC_014650:1893758:1912565191256519156273063Geobacillus sp. Y4.1MC1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-29131
NC_010688:1435694:1438913143891314422033291Xanthomonas campestris pv. campestris, complete genometype I site-specific deoxyribonuclease3e-29131
NC_009801:2898426:2915437291543729186763240Escherichia coli E24377A, complete genometype I site-specific deoxyribonuclease, HsdR family3e-29131
NC_009633:4097536:4139932413993241430573126Alkaliphilus metalliredigens QYMF chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-29130
NC_007759:2097734:2118210211821021213413132Syntrophus aciditrophicus SB, complete genometype I restriction-modification system restriction subunit2e-28129
NC_009524:1369395:1369395136939513727183324Psychrobacter sp. PRwf-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-28129
NC_010995:4338860:4344576434457643477883213Cellvibrio japonicus Ueda107, complete genomeHsdR1e-28129
NC_014934:3786132:3795481379548137985853105Cellulophaga algicola DSM 14237 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family8e-29129
NC_007498:3399478:3413541341354134164952955Pelobacter carbinolicus DSM 2380, complete genomeR (restriction) subunit/helicase2e-28128
NC_012968:239476:2425242425242457453222Methylotenera mobilis JLW8, complete genometype I site-specific deoxyribonuclease, HsdR family3e-28127
NC_013222:817686:8330478330478360493003Robiginitalea biformata HTCC2501, complete genomeHsdR3e-28127
NC_004463:5540924:5554605555460555578623258Bradyrhizobium japonicum USDA 110, complete genomeputative type I restriction enzyme4e-28127
NC_013508:3188978:3236284323628432393793096Edwardsiella tarda EIB202, complete genometype I site-specific deoxyribonuclease, HsdR family5e-28127
NC_013929:3299736:3328881332888133319673087Streptomyces scabiei 87.22 chromosome, complete genometype I restriction protein6e-28127
NC_020210:1275031:1286489128648912895543066Geobacillus sp. GHH01, complete genomeputative type I restriction enzyme HindVIIP R protein1e-27126
NC_012779:3316877:3328524332852433316193096Edwardsiella ictaluri 93-146, complete genometype I restriction enzyme R protein (HsdR)7e-28126
NC_014165:2928464:2934819293481929380253207Thermobispora bispora DSM 43833 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-27125
NC_021184:207492:2087402087402117933054Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family1e-27125
NC_006510:1400000:1407300140730014103653066Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity protein2e-27125
NC_014217:2760898:2767311276731127705263216Starkeya novella DSM 506 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family5e-27124
NC_012881:3004784:3004784300478430079153132Desulfovibrio salexigens DSM 2638, complete genometype I site-specific deoxyribonuclease, HsdR family4e-27124
NC_011283:5011497:5014646501464650177413096Klebsiella pneumoniae 342 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-27124
NC_012778:1573847:1585790158579015889693180Eubacterium eligens ATCC 27750, complete genometype I restriction enzyme, R subunit4e-27124
NC_014814:3892000:3904593390459339076793087Mycobacterium sp. Spyr1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-27124
NC_015161:1556766:1587325158732515906483324Deinococcus proteolyticus MRP chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-27123
NC_015676:1530000:1546589154658915497533165Methanosalsum zhilinae DSM 4017 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family7e-27123
NC_016940:271500:2841372841372869472811Saprospira grandis str. Lewin chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-27123
NC_015177:1476073:1502540150254015056773138Pedobacter saltans DSM 12145 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-26122
NC_021177:3627947:3642213364221336452903078Streptomyces fulvissimus DSM 40593, complete genomeRestriction enzyme type I helicase subunits4e-26120
NC_014365:2810405:2829464282946428324182955Desulfarculus baarsii DSM 2075 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-26120
NC_017278:258921:2767242767242796422919Thermus sp. CCB_US3_UF1 chromosome, complete genomeType I site-specific deoxyribonuclease, HsdR4e-26120
NC_012440:1215838:1223563122356312267243162Persephonella marina EX-H1, complete genometype I restriction enzyme R protein (HsdR)8e-26120
NC_011831:2213306:2213965221396522169132949Chloroflexus aggregans DSM 9485, complete genometype I site-specific deoxyribonuclease, HsdR family1e-25119
NC_005090:1082213:1086874108687410896932820Wolinella succinogenes DSM 1740, complete genomeHSDR PROTEIN PROBABLE TYPE I RESTRICTION ENZYME RESTRICTIONCHAIN1e-25119
NC_007164:1434305:1469838146983814729243087Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, restriction enzyme3e-25118
NC_015635:4864349:4877119487711948802203102Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system restriction subunit3e-25117
NC_018721:943801:9515369515369545383003Psychroflexus torquis ATCC 700755 chromosome, complete genomeType I restriction-modification system, restriction subunit HsdR4e-25117
NC_010645:558974:5646425646425677433102Bordetella avium 197N, complete genometype I restriction enzyme EcoR124II R protein4e-25117
NC_019902:1863162:1865231186523118683473117Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, restriction subunit R7e-25116
NC_010364:84900:9306793067960693003Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeR8e-25116
NC_002607:81452:9063990639936413003Halobacterium sp. NRC-1, complete genomeRmeR8e-25116
NC_011832:1122268:1128539112853911314362898Candidatus Methanosphaerula palustris E1-9c, complete genometype I site-specific deoxyribonuclease, HsdR family2e-24115
NC_013959:2449315:2459306245930624625483243Sideroxydans lithotrophicus ES-1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-24115
NC_019977:1353332:1364126136412613672573132Methanomethylovorans hollandica DSM 15978, complete genometype I site-specific deoxyribonuclease, HsdR family2e-24115
NC_010003:1126800:1139276113927611424793204Petrotoga mobilis SJ95, complete genometype I site-specific deoxyribonuclease, HsdR family1e-24115
NC_012489:209016:2090162090162121653150Gemmatimonas aurantiaca T-27, complete genometype I restriction-modification system restriction subunit4e-24114
NC_011498:448000:4508004508004519901191Helicobacter pylori P12, complete genome4e-24114
NC_011601:1114104:1150984115098411540793096Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-24114
NC_013037:6281164:6318483631848363214072925Dyadobacter fermentans DSM 18053, complete genometype I site-specific deoxyribonuclease, HsdR family9e-24113
NC_017093:7255652:7267831726783172710493219Actinoplanes missouriensis 431, complete genomeputative restriction-modification system endonuclease2e-23112
NC_011886:1176238:1202179120217912054033225Arthrobacter chlorophenolicus A6, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23112
NC_015942:2213710:2230085223008522331623078Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-23112
NC_012669:4323490:4325841432584143291343294Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23112
NC_010175:2488000:2497678249767825008123135Chloroflexus aurantiacus J-10-fl, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23112
NC_017515:1429317:1434025143402514371233099Neisseria meningitidis M04-240196 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-23112
NC_013235:1218378:1227836122783612310363201Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23112
NC_011901:1860887:1886648188664818897733126Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system restriction subunit3e-23111
NC_011206:2369500:2379805237980523828733069Acidithiobacillus ferrooxidans ATCC 53993, complete genometype I site-specific deoxyribonuclease, HsdR family3e-23111
NC_014752:1530000:1533219153321915363173099Neisseria lactamica ST-640, complete genome3e-23111
NC_017505:841496:8555268555268586573132Neisseria meningitidis alpha710 chromosome, complete genomeputative type I restriction enzyme EcoR124II R protein2e-23111
NC_017514:1396000:1399124139912414022553132Neisseria meningitidis M01-240149 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-23111
NC_010163:614634:6241646241646273073144Acholeplasma laidlawii PG-8A chromosome, complete genometype I site-specific restriction-modification system, R (restriction) subunit2e-23111
NC_015633:2919501:2921615292161529253973783Vibrio anguillarum 775 chromosome chromosome I, complete sequencetype I restriction-modification system restriction8e-23110
NC_016026:1224129:1236374123637412392052832Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative type I restriction enzyme R protein8e-23110
NC_015761:299386:3128843128843159913108Salmonella bongori NCTC 12419, complete genometype I restriction enzyme8e-23110
NC_003112:844000:8588708588708616352766Neisseria meningitidis MC58, complete genomeputative type I restriction enzyme EcoR124II R protein7e-23110
NC_017516:1439775:1442427144242714451922766Neisseria meningitidis H44/76 chromosome, complete genome7e-23110
NC_008782:3800500:3806730380673038097323003Acidovorax sp. JS42, complete genometype I site-specific deoxyribonuclease, HsdR family5e-23110
NC_003901:2727361:2732159273215927352873129Methanosarcina mazei Go1, complete genometype I restriction-modification system restriction subunit4e-23110
NC_015161:1556766:1573953157395315771023150Deinococcus proteolyticus MRP chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-23110
NC_014371:1218813:1238617123861712414602844Prevotella melaninogenica ATCC 25845 chromosome chromosome II,type I site-specific deoxyribonuclease, HsdR family1e-22109
NC_012668:160357:1715011715011752833783Vibrio cholerae MJ-1236 chromosome 1, complete sequencetype I site-specific deoxyribonuclease HsdR family1e-22109
NC_012668:1623350:1637187163718716409693783Vibrio cholerae MJ-1236 chromosome 1, complete sequencetype I site-specific deoxyribonuclease HsdR family1e-22109
NC_012668:2258854:2273958227395822777403783Vibrio cholerae MJ-1236 chromosome 1, complete sequencetype I site-specific deoxyribonuclease HsdR family1e-22109
NC_004757:2730057:2762574276257427655733000Nitrosomonas europaea ATCC 19718, complete genomeRestriction enzyme type I helicase subunits and related helicases1e-22109
NC_016051:1005188:1015085101508510180362952Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system restriction subunit R9e-23109
NC_016590:1380092:1387475138747513905613087Burkholderia sp. YI23 chromosome 3, complete sequenceHsdR family type I site-specific deoxyribonuclease9e-23109
NC_007356:51080:9336693366963502985Dehalococcoides sp. CBDB1, complete genomerestriction enzyme type I helicase subunit3e-22108
NC_015144:47783:8051080510836113102Weeksella virosa DSM 16922 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-22108
NC_013799:1:1291912919160863168Hydrogenobacter thermophilus TK-6, complete genometype I restriction-modification system R subunit2e-22108
NC_017161:1:1298012980161473168Hydrogenobacter thermophilus TK-6 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-22108
NC_016002:1048420:1071510107151010748273318Pseudogulbenkiania sp. NH8B, complete genometype I restriction-modification system restriction subunit2e-22108
NC_015588:939037:9574719574719607673297Isoptericola variabilis 225 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-22108
NC_020054:4161049:4175461417546141783312871Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, R subunit1e-22108
NC_015634:3017564:3030763303076330340443282Bacillus coagulans 2-6 chromosome, complete genometype I site-specific deoxyribonuclease7e-22107
NC_010682:3313944:3322510332251033254972988Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family5e-22107
NC_011601:4856717:4862628486262848657443117Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme R subunit5e-22107
NC_009725:692237:7022167022167053683153Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-22107
NC_011149:4677412:4702862470286247059243063Salmonella enterica subsp. enterica serovar Agona str. SL483,type I site-specific deoxyribonuclease, HsdR family4e-22107
NC_015581:680460:6804606804606835583099Thioalkalimicrobium cyclicum ALM1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-22107
NC_008344:554229:5591105591105623283219Nitrosomonas eutropha C91, complete genometype I site-specific deoxyribonuclease, HsdR family protein4e-22107
NC_007778:3470661:3480367348036734834833117Rhodopseudomonas palustris HaA2, complete genometype I site-specific deoxyribonuclease, HsdR family3e-22107
NC_008786:3323167:3360938336093833641503213Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-21106
NC_012779:996879:1002399100239910056773279Edwardsiella ictaluri 93-146, complete genomeHsdR1e-21106
NC_008541:1042322:1063872106387210669943123Arthrobacter sp. FB24 chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family1e-21106
NC_015320:1690047:1692564169256416954522889Archaeoglobus veneficus SNP6 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-22106
NC_015966:1661329:1664443166444316676553213Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-22106
NC_009778:567000:5863505863505894813132Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-21105
NC_013720:1382561:1399580139958014026423063Pirellula staleyi DSM 6068, complete genometype I site-specific deoxyribonuclease, HsdR family3e-21105
NC_009033:755226:7623997623997654613063Staphylothermus marinus F1, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_013411:284461:2947242947242977353012Geobacillus sp. Y412MC61, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_014915:2427000:2441753244175324447643012Geobacillus sp. Y412MC52 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_018868:1352000:1363394136339413664563063Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-21105
NC_013943:2705983:2717489271748927205753087Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-21105
NC_007948:1972290:2004590200459020076943105Polaromonas sp. JS666, complete genometype I site-specific deoxyribonuclease, HsdR family2e-21105
NC_010994:859500:8752208752208782883069Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, restriction subunit2e-21105
NC_016147:2337244:2345134234513423479442811Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction enzyme type I helicase subunits-related helicase1e-21105
NC_014002:1061501:1072360107236010752572898Methanohalophilus mahii DSM 5219 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-21104
NC_010581:2999002:3042685304268530457683084Beijerinckia indica subsp. indica ATCC 9039, complete genometype I site-specific deoxyribonuclease, HsdR family3e-21104
NC_015578:1940097:1954771195477119580073237Treponema primitia ZAS-2 chromosome, complete genomeHsdR3e-21104
NC_016629:3789554:3801760380176038048223063Desulfovibrio africanus str. Walvis Bay chromosome, completeHsdR family type I site-specific deoxyribonuclease9e-21103
NC_014315:1396990:1414766141476614179243159Nitrosococcus watsoni C-113 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-21103
NC_014974:758129:7616407616407645372898Thermus scotoductus SA-01 chromosome, complete genometype I restriction-modification system subunit R6e-21103
NC_015847:808931:8206928206928237903099Methanococcus maripaludis XI chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-21103
NC_015740:3631326:3636307363630736394083102Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype I restriction-modification enzyme, R subunit5e-21103
NC_020260:603796:6153756153756185063132Cronobacter sakazakii Sp291, complete genomehypothetical protein5e-21103
NC_005823:1105524:1118133111813311212313099Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130type I restriction enzyme5e-21103
NC_012491:743883:7553787553787584763099Brevibacillus brevis NBRC 100599, complete genometype I restriction modification system endonuclease5e-21103
NC_013410:1651000:1665900166590016690223123Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HsdR family type I site-specific deoxyribonuclease2e-20102
NC_015703:4483500:4501508450150845043452838Runella slithyformis DSM 19594 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-20102
NC_015497:4564339:4564339456433945676383300Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-20102
NC_011185:37922:4789947899509853087Vibrio fischeri MJ11 plasmid pMJ100, complete sequencetype I site-specific deoxyribonuclease2e-20102
NC_013595:8338619:8348071834807183512893219Streptosporangium roseum DSM 43021, complete genomeHsdR family type I site-specific deoxyribonuclease2e-20102
NC_004369:2465461:2476654247665424798543201Corynebacterium efficiens YS-314, complete genomeputative type I restriction-modification system subunit R2e-20102
NC_020164:89214:1035451035451063402796Staphylococcus warneri SG1, complete genometype I site-specific restriction-modification system restriction subunit1e-20102
NC_013235:5127148:5140644514064451437303087Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family1e-20102
NC_011294:4604283:4605367460536746086333267Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction-modification system subunit R1e-20102
NC_015557:90503:99148991481023153168Hydrogenobaculum sp. 3684 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-20102
NC_020411:90538:99183991831023503168Hydrogenobaculum sp. HO, complete genometype I site-specific deoxyribonuclease, HsdR family1e-20102
NC_015587:90539:99184991841023513168Hydrogenobaculum sp. SHO chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-20102
NC_015865:229883:2364722364722394202949Thermococcus sp. 4557 chromosome, complete genomeType I restriction-modification system restriction subunit R1e-20102
NC_014618:690056:7075817075817104962916Enterobacter cloacae SCF1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-20102
NC_014011:472650:4821084821084853023195Aminobacterium colombiense DSM 12261 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-20101
NC_012483:1813521:1833057183305718362033147Acidobacterium capsulatum ATCC 51196, complete genometype I site-specific deoxyribonuclease, HsdR family4e-20101
NC_008313:1:1072810728140483321Ralstonia eutropha H16 chromosome 1, complete sequenceType I restriction-modification system restriction subunit3e-20101
NC_011205:4761598:4762682476268247659483267Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-20101
NC_014216:2334568:2347674234767423508863213Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-20101
NC_014655:1396672:1400184140018414032823099Leadbetterella byssophila DSM 17132 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family3e-20101
NC_015696:285456:2978402978403009893150Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, R subunit3e-20101
NC_009943:272158:2740102740102771263117Candidatus Desulfococcus oleovorans Hxd3, complete genometype I site-specific deoxyribonuclease, HsdR family2e-20101
NC_009523:341347:3564713564713595573087Roseiflexus sp. RS-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-20100
NC_013949:939695:9506209506209536493030Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system restriction enzyme5e-20100
NC_013156:728397:7283977283977314473051Methanocaldococcus fervens AG86, complete genometype I site-specific deoxyribonuclease, HsdR family5e-20100
NC_004757:427483:4329294329294360783150Nitrosomonas europaea ATCC 19718, complete genomeRestriction enzyme type I helicase subunits and related helicases5e-20100
NC_002163:1471517:1479390147939014824853096Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative type I restriction enzyme R protein1e-1999.4
NC_007951:4608560:4611434461143446145203087Burkholderia xenovorans LB400 chromosome 1, complete sequenceType I site-specific deoxyribonuclease HsdR1e-1999.4
NC_007413:1405817:1412992141299214159162925Anabaena variabilis ATCC 29413, complete genomeType I site-specific deoxyribonuclease HsdR4e-1997.4
NC_017080:3317701:3329289332928933325043216Phycisphaera mikurensis NBRC 102666, complete genometype I restriction-modification system restriction subunit7e-1997.1
NC_014314:212579:2213412213412243913051Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeHsdR family type I site-specific deoxyribonuclease9e-1996.7
NC_015580:293803:2998742998743030143141Novosphingobium sp. PP1Y, complete genomeputative type I restriction-modification system HsdR1e-1896.3
NC_015138:5342473:5346115534611553493183204Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I site-specific deoxyribonuclease, HsdR family1e-1896.3
NC_014638:183115:2129242129242159683045Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1896.3
NC_017271:1289278:1299052129905213021743123Xanthomonas campestris pv. raphani 756C chromosome, completetype I restriction-modification system restriction subunit1e-1895.9
NC_014634:28690:4845948459512632805Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencetype I site-specific deoxyribonuclease, HsdR family1e-1895.9
NC_018867:1407163:1439736143973614429303195Dehalobacter sp. CF chromosome, complete genomeType I restriction-modification system, restriction subunit R1e-1895.9
NC_015437:767572:7808307808307838893060Selenomonas sputigena ATCC 35185 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1895.5
NC_017033:678321:6880396880396911403102Frateuria aurantia DSM 6220 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-1895.5
NC_007969:1664500:1665480166548016686623183Psychrobacter cryohalolentis K5, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1895.5
NC_015562:755785:7662437662437692933051Methanotorris igneus Kol 5 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1894.7
NC_014828:501342:5111395111395141563018Ethanoligenens harbinense YUAN-3 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1894.4
NC_012917:985617:1000970100097010040653096Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1894.4
NC_008609:1976403:1993572199357219966523081Pelobacter propionicus DSM 2379, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1894.4
NC_009439:608500:6175046175046207673264Pseudomonas mendocina ymp, complete genomeHsdR family type I site-specific deoxyribonuclease6e-1894
NC_011884:3099488:3114437311443731175983162Cyanothece sp. PCC 7425, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1893.2
NC_014550:2562053:2587519258751925906203102Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system restriction subunit1e-1792.8
NC_007298:1418500:1419442141944214226753234Dechloromonas aromatica RCB, complete genomeType I site-specific deoxyribonuclease HsdR2e-1792
NC_016803:2431672:2444040244404024472193180Desulfovibrio desulfuricans ND132 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-1792
NC_016613:2596464:2610213261021326134403228Vibrio sp. EJY3 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease3e-1791.3
NC_015458:2338437:2365206236520623684303225Pusillimonas sp. T7-7 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-1791.3
NC_015387:1091403:1101507110150711038582352Marinithermus hydrothermalis DSM 14884 chromosome, complete genome3e-1791.3
NC_010617:558954:5720755720755752093135Kocuria rhizophila DC2201, complete genometype I restriction enzyme R protein5e-1790.5
NC_011992:1968258:1985201198520119877682568Acidovorax ebreus TPSY, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1790.1
NC_009076:75535:9256692566958353270Burkholderia pseudomallei 1106a chromosome I, complete sequencetype I site-specific deoxyribonuclease HsdR1e-1689.7
NC_006513:1547092:1556324155632415593563033Azoarcus sp. EbN1, complete genomeType I restriction-modification system endonuclease2e-1688.6
NC_012881:1802000:1817360181736018205903231Desulfovibrio salexigens DSM 2638, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1688.2
NC_016589:183432:2053962053962084733078Burkholderia sp. YI23 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease4e-1687.8
NC_016584:1998000:2039833203983320430423210Desulfosporosinus orientis DSM 765 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-1687.8
NC_016047:2480921:2487836248783624910213186Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification system, R subunit5e-1687.4
NC_005139:2201820:2212470221247022155323063Vibrio vulnificus YJ016 chromosome I, complete sequenceputative type I site-specific restriction-modification system, R (restriction) subunit5e-1687.4
NC_020541:4122852:4145366414536641485813216Rhodanobacter sp. 2APBS1, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1585.9
NC_010645:369408:3929003929003960343135Bordetella avium 197N, complete genomerestriction-modification system, endonuclease subunit2e-1585.5
NC_008786:2729635:2740582274058227436323051Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1585.1
NC_005363:3562205:3573462357346235766893228Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system restriction subunit4e-1584.7
NC_010939:321492:3322653322653353993135Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative type I site-specific restriction- modification system, R (restriction) subunit4e-1584.7
NC_008699:1132790:1169096116909611721373042Nocardioides sp. JS614, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1584.3
NC_007777:4796627:4793298479329847966303333Frankia sp. CcI3, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1584.3
NC_009053:313779:3226483226483257853138Actinobacillus pleuropneumoniae L20, complete genomeputative type I site-specific restriction-modification system, R (restriction) subunit5e-1584.3
NC_014366:478000:4983264983265015683243Gamma proteobacterium HdN1, complete genomeType I restriction-modification system restriction subunit5e-1584
NC_010278:315941:3274473274473305843138Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,type I site-specific deoxyribonuclease7e-1583.6
NC_014220:1162948:1164843116484311679953153Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1583.2
NC_008278:5399715:5419387541938754227523366Frankia alni ACN14a, complete genomeType I restriction-modification system R subunit4e-1480.9
NC_014328:303063:3461993461993501553957Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, endonuclease subunit5e-1480.9
NC_014815:6616500:6668095666809566712143120Micromonospora sp. L5 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family5e-1480.9
NC_007644:1694879:1704445170444517073422898Moorella thermoacetica ATCC 39073, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1379.7
NC_014727:995480:1001764100176410047843021Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hsdr-type i restriction subunit2e-1379
NC_014210:3671495:3686800368680036900573258Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,type I site-specific deoxyribonuclease, HsdR family2e-1378.6
NC_020302:744956:7596427596427628213180Corynebacterium halotolerans YIM 70093 = DSM 44683, completeHsdR family type I site-specific deoxyribonuclease3e-1378.2
NC_016838:85487:97669976691001642496Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative type I restriction-modification enzyme R subunit4e-1377.8
NC_011662:1:84868486116113126Thauera sp. MZ1T, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1377
NC_016514:506611:5193375193375224563120Enterobacter cloacae EcWSU1 chromosome, complete genometype I restriction enzyme R protein8e-1376.6
NC_020156:861402:8583508583508614093060Nonlabens dokdonensis DSW-6, complete genometype III restriction enzyme, res subunit2e-1275.9
NC_008054:899441:9055129055129085323021Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, restriction subunit2e-1275.5
NC_014323:5219154:5225775522577552289243150Herbaspirillum seropedicae SmR1 chromosome, complete genomeHsdR-like type I restriction modification system protein2e-1275.5
NC_010545:1475410:1487761148776114909553195Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, restriction subunit3e-1274.7
NC_018012:598724:6170796170796203183240Thiocystis violascens DSM 198 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease6e-1273.9
NC_012030:246000:2675552675552690421488Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, complete7e-1273.6
NC_014562:3985500:3994631399463139978643234Pantoea vagans C9-1 chromosome, complete genometype I restriction enzyme R protein1e-1172.8
NC_004307:2208591:2222402222240222256893288Bifidobacterium longum NCC2705, complete genomeHsdR-like protein of type I restriction modification system2e-1172.4
NC_007969:2885249:2898455289845529016583204Psychrobacter cryohalolentis K5, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1172
NC_014638:1333976:1340750134075013440193270Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR-like protein type I restriction modification system2e-1172
NC_014219:192555:2143022143022174663165Bacillus selenitireducens MLS10 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1172
NC_017221:535000:5490715490715523613291Bifidobacterium longum subsp. longum KACC 91563 chromosome,HsdR-like protein of type I restriction modification system3e-1171.6
NC_014616:1296287:1301270130127013045393270Bifidobacterium bifidum S17 chromosome, complete genomeHsdR-like protein of Type I restriction-modification system4e-1170.9
NC_014215:142500:1547171547171577553039Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,6e-1170.5
NC_007760:2611608:2624845262484526279853141Anaeromyxobacter dehalogenans 2CP-C, complete genometype I site-specific deoxyribonuclease, HsdR family7e-1170.5
NC_014169:1784435:1790719179071917940093291Bifidobacterium longum subsp. longum JDM301 chromosome, completeHsdR-like protein of type I restriction modification system8e-1170.1
NC_014973:3414459:3426539342653934297393201Geobacter sp. M18 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-1170.1
NC_012669:549500:5549985549985580453048Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1170.1
NC_015052:1771976:1777032177703217803193288Bifidobacterium longum subsp. infantis 157F, complete genomedeoxyribonuclease1e-1069.7
NC_010816:2326453:2341549234154923448363288Bifidobacterium longum DJO10A, complete genomeType I site-specific restriction-modification system R subunit1e-1069.7
NC_008705:27434:3581135811391373327Mycobacterium sp. KMS, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1069.3
NC_008146:20047:2989629896332223327Mycobacterium sp. MCS, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1069.3
NC_009832:4521585:4539525453952545427103186Serratia proteamaculans 568, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1069.3
NC_007681:542494:5593295593295620372709Methanosphaera stadtmanae DSM 3091, complete genomeputative type I restriction-modification system, restriction subunit2e-1069.3
NC_015578:1430112:1440645144064514438663222Treponema primitia ZAS-2 chromosome, complete genomeputatIve type i restriction enzyme hindviip r protein4e-1067.8
NC_007508:570000:5737155737155766992985Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (restriction subunit)5e-1067.4
NC_016012:665171:6761916761916794063216Candidatus Arthromitus sp. SFB-rat-Yit, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0966.2
NC_009706:2673906:2673906267390626771153210Clostridium kluyveri DSM 555 chromosome, complete genomeType I restriction enzyme, endonuclease subunit1e-0965.9
NC_011837:2605409:2605409260540926086183210Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0965.9
NC_004369:256262:2815552815552848543300Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-0965.1
NC_020450:875757:8913718913718943582988Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme R protein4e-0964.3
NC_015138:1:1270812708160043297Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I site-specific deoxyribonuclease, HsdR family5e-0964.3
NC_015953:2349503:2371449237144923750393591Streptomyces sp. SirexAA-E chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-0963.5
NC_010682:460523:4776464776464806152970Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family1e-0862.8
NC_004578:1190000:1195573119557311986953123Pseudomonas syringae pv. tomato str. DC3000, complete genometype I restriction-modification enzyme, R subunit, putative2e-0862.4
NC_012912:1053618:1077362107736210803342973Dickeya zeae Ech1591, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0862.4
NC_006270:741731:7530187530187561763159Bacillus licheniformis ATCC 14580, complete genomeHsdRI2e-0862
NC_006322:741516:7528027528027559603159Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-0862
NC_015565:2408669:2418136241813624212373102Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetype I site-specific deoxyribonuclease, HsdR family3e-0861.6
NC_014970:530748:5415305415305444782949Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system endonuclease, R subunit4e-0861.2
NC_011901:625712:6306786306786338363159Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I site-specific restriction-modification system, R subunit6e-0860.5
NC_020209:4768500:4778873477887347822173345Pseudomonas poae RE*1-1-14, complete genometype I restriction-modification system restriction subunit7e-0860.5
NC_015434:4640769:4651991465199146551643174Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein8e-0860.1
NC_018604:1292889:1292889129288912959963108Brachyspira pilosicoli WesB complete genometype-I restriction endonuclease R subunit HsdR8e-0860.1
NC_018607:1505908:1515795151579515182542460Brachyspira pilosicoli B2904 chromosome, complete genometype-I restriction endonuclease R subunit HsdR9e-0860.1
NC_014330:169862:1847931847931878673075Brachyspira pilosicoli 95/1000 chromosome, complete genometype-I restriction endonuclease R subunit HsdR1e-0760.1
NC_014408:1340016:1349186134918613520742889Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit R1e-0759.3
NC_015222:3137167:3146394314639431500143621Nitrosomonas sp. AL212 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0758.9
NC_008786:3915000:3927676392767639306302955Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family3e-0758.5
NC_008740:443274:4741304741304773393210Marinobacter aquaeolei VT8, complete genomeprotein of unknown function DUF4503e-0758.2
NC_011146:4070000:4079439407943940818472409Geobacter bemidjiensis Bem, complete genometype III restriction protein res subunit3e-0758.2
NC_018721:3155579:3162147316214731654253279Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, restriction subunit R HsdR3e-0758.2
NC_016803:593484:6049616049616083293369Desulfovibrio desulfuricans ND132 chromosome, complete genomeType I site-specific deoxyribonuclease5e-0757.4
NC_015663:2090442:2109011210901121122593249Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative type I restriction-modification system, restriction (R) subunit5e-0757.4
NC_007086:557789:5631145631145660982985Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction-modification system endonuclease7e-0757
NC_003902:555699:5610245610245640082985Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction-modification system endonuclease7e-0757
NC_005773:106000:1169791169791199963018Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I restriction-modification system restriction subunit7e-0757
NC_015572:4618467:4643193464319346462793087Methylomonas methanica MC09 chromosome, complete genomeRestriction endonuclease, type I, EcoRI, R subunit/Type III1e-0656.6
NC_008322:2077628:2108324210832421113593036Shewanella sp. MR-7, complete genometype III restriction enzyme, res subunit1e-0656.2
NC_017068:1143515:1186826118682611898583033Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit1e-0656.2
NC_005139:796546:8143278143278174133087Vibrio vulnificus YJ016 chromosome I, complete sequencetype I site-specific restriction-modification system, R (restriction) subunit2e-0655.5
NC_009052:4335754:4348197434819743512683072Shewanella baltica OS155, complete genometype I site-specific deoxyribonuclease, HsdR family4e-0654.7
NC_020453:1881904:1898985189898519009281944Agromonas oligotrophica S58 DNA, complete genometype III restriction enzyme5e-0653.9
NC_006350:1084930:1102333110233311054463114Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein6e-0653.9
NC_010571:1334000:1346278134627813493553078Opitutus terrae PB90-1, complete genometype I site-specific deoxyribonuclease, HsdR family8e-0653.5