Pre_GI: BLASTP Hits

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Query: NC_011035:968569:977198 Neisseria gonorrhoeae NCCP11945 chromosome, complete genome

Start: 977198, End: 978037, Length: 840

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: Neisseria gonorrhoeae NCCP11945 was isolated in 2002 from a vaginal smear of a Korean patient. This is a multidrug-resistant strain. One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. Pathogenic functions include the antigenically variable type IV pilus and the opacity (Opa) proteins. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017511:884083:893287893287894126840Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein2e-132471
NC_002946:684728:695182695182696024843Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein4e-131467
NC_011748:3360967:339496733949673395797831Escherichia coli 55989, complete genomehypothetical protein1e-40167
CU928145:3360967:339496733949673395797831Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-40167
NC_010498:4856011:486460348646034865442840Escherichia coli SMS-3-5, complete genomehypothetical protein4e-39162
NC_014483:3629282:364711336471133647940828Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein2e-33142
NC_015222:2475792:249302924930292493316288Nitrosomonas sp. AL212 chromosome, complete genome2e-1583.6