Pre_GI: BLASTP Hits

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Query: NC_011004:5520771:5523746 Rhodopseudomonas palustris TIE-1, complete genome

Start: 5523746, End: 5524432, Length: 687

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005296:5238882:524185952418595242545687Rhodopseudomonas palustris CGA009, complete genomeL-fuculose phosphate aldolase1e-131468
NC_009654:4716417:473412347341234734779657Marinomonas sp. MWYL1, complete genomeL-fuculose-phosphate aldolase3e-69261
NC_008343:2389710:240451224045122405192681Granulibacter bethesdensis CGDNIH1, complete genomeL-fuculose phosphate aldolase2e-58225
NC_016614:1178000:119832811983281198975648Vibrio sp. EJY3 chromosome 2, complete sequenceL-fuculose phosphate aldolase6e-56217
NC_017030:8766757:879242687924268793070645Corallococcus coralloides DSM 2259 chromosome, complete genomeL-fuculose phosphate aldolase1e-53209
NC_018607:1463918:148303814830381483748711Brachyspira pilosicoli B2904 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase5e-53207
NC_019908:499929:504674504674505384711Brachyspira pilosicoli P43/6/78 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase5e-53207
NC_014330:139175:152447152447153157711Brachyspira pilosicoli 95/1000 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase/aldolase5e-53207
NC_008309:1628939:163889516388951639542648Haemophilus somnus 129PT, complete genomeL-fuculose phosphate aldolase8e-53206
NC_017243:2079018:208022820802282080932705Brachyspira intermedia PWS/A chromosome, complete genomeL-fuculose phosphate aldolase8e-53206
NC_014150:2798000:280259828025982803263666Brachyspira murdochii DSM 12563 chromosome, complete genomeclass II aldolase/adducin family protein8e-52203
NC_010939:1920781:194387119438711944521651Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeL-fuculose phosphate aldolase2e-51202
NC_009053:1895485:191790619179061918556651Actinobacillus pleuropneumoniae L20, complete genomeL-fuculose phosphate aldolase2e-51202
NC_012225:880983:904044904044904706663Brachyspira hyodysenteriae WA1, complete genomeL-fuculose phosphate aldolase1e-51202
NC_010167:1085106:108698110869811087640660Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein2e-46185
NC_003318:183914:200223200223200957735Brucella melitensis 16M chromosome II, complete sequenceL-FUCULOSE PHOSPHATE ALDOLASE2e-46185
NC_010104:1096081:109795610979561098615660Brucella canis ATCC 23365 chromosome II, complete sequenceprobable L-fuculose-1-phosphate aldolase subunit P3e-46184
NC_004311:1096649:109852410985241099183660Brucella suis 1330 chromosome II, complete sequenceL-fuculose phosphate aldolase, putative3e-46184
NC_013118:1109610:111148511114851112144660Brucella microti CCM 4915 chromosome 2, complete genomeL-fuculose phosphate aldolase, putative5e-46184
NC_007624:1046500:104850310485031049162660Brucella melitensis biovar Abortus 2308 chromosome II, completeClass II aldolase/adducin, N-terminal:ATP/GTP-binding site motif A (P-loop)7e-46183
NC_010740:1051000:105300510530051053664660Brucella abortus S19 chromosome 2, complete sequenceClass II aldolase/adducin, N-terminal7e-46183
NC_006933:1051873:105374810537481054407660Brucella abortus biovar 1 str. 9-941 chromosome II, completehypothetical L-fuculose phosphate aldolase7e-46183
NC_015858:1150446:115232111523211152980660Brucella pinnipedialis B2/94 chromosome chromosome 2, completeL-fuculose phosphate aldolase2e-45182
NC_018644:210627:230860230860231501642Alpha proteobacterium HIMB59 chromosome, complete genomealdolase class II-like protein2e-40166
NC_014011:527681:531124531124531765642Aminobacterium colombiense DSM 12261 chromosome, complete genomeclass II aldolase/adducin family protein5e-38157
NC_019974:1184871:1222117122211712234451329Natronococcus occultus SP4, complete genomeribulose-5-phosphate 4-epimerase-like epimerase or aldolase6e-38157
NC_007498:3540945:354094535409453541607663Pelobacter carbinolicus DSM 2380, complete genomeL-fuculose-1-phosphate aldolase7e-37154
NC_012881:3362955:336295533629553363608654Desulfovibrio salexigens DSM 2638, complete genomeclass II aldolase/adducin family protein1e-36153
NC_011899:1021672:103940510394051040049645Halothermothrix orenii H 168, complete genomeclass II aldolase/adducin family protein4e-35148
NC_015958:1516944:153105415310541531764711Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeclass II aldolase/adducin family protein2e-34145
NC_002689:1507900:152602615260261526682657Thermoplasma volcanium GSS1, complete genomeL-fuculose-phosphate aldolase1e-29130
NC_007503:1383255:139086213908621391494633Carboxydothermus hydrogenoformans Z-2901, complete genomeL-fuculose phosphate aldolase4e-28124
NC_011766:275673:289708289708290346639Desulfurococcus kamchatkensis 1221n chromosome, complete genomeclass II aldolase/adducin family protein2e-27122
NC_011899:1969187:197188519718851972529645Halothermothrix orenii H 168, complete genomeL-fuculose phosphate aldolase9e-25113
NC_015954:189000:214037214037214690654Halophilic archaeon DL31 chromosome, complete genomeclass II aldolase/adducin family protein2e-24112
NC_013642:942767:954194954194954832639Thermotoga naphthophila RKU-10, complete genomeclass II aldolase/adducin family protein5e-23107
NC_021182:3771523:378378737837873784449663Clostridium pasteurianum BC1, complete genomeribulose-5-phosphate 4-epimerase-like epimerase or aldolase2e-22105
NC_016070:167362:170623170623171183561Thermoproteus tenax Kra 1, complete genomefuculose-1-phosphate aldolase2e-22105
NC_010001:1488000:149364214936421494436795Clostridium phytofermentans ISDg, complete genomeclass II aldolase/adducin family protein5e-2097.8
NC_010407:151599:155424155424156134711Clavibacter michiganensis subsp. sepedonicus chromosome, completeL-ribulose-5-phosphate 4-epimerase2e-1996.3
NC_013406:4478000:449540544954054496064660Paenibacillus sp. Y412MC10 chromosome, complete genomeclass II aldolase/adducin family protein2e-1995.9
NC_014363:114239:124635124635125315681Olsenella uli DSM 7084 chromosome, complete genomeclass II aldolase/adducin family protein9e-1993.6
NC_015873:1933036:195310219531021953734633Megasphaera elsdenii DSM 20460, complete genomeputative L-ribulose-5-phosphate 4-epimerase3e-1892
NC_016051:1471782:148780914878091488366558Thermococcus sp. AM4 chromosome, complete genomeribulose-5-phosphate 4-epimerase- related epimerase/aldolase1e-1790.1
NC_014363:427393:437839437839438507669Olsenella uli DSM 7084 chromosome, complete genomeclass II aldolase/adducin family protein1e-1790.1
NC_009664:4423829:452416445241644524844681Kineococcus radiotolerans SRS30216, complete genomeclass II aldolase/adducin family protein5e-1787.8
NC_014650:2500817:251594825159482516622675Geobacillus sp. Y4.1MC1 chromosome, complete genomeclass II aldolase/adducin family protein6e-1787.8
NC_015574:2501869:250323225032322503858627Methanobacterium sp. SWAN-1 chromosome, complete genomeL-fuculose-phosphate aldolase1e-1686.3
NC_015865:1468689:148915114891511489711561Thermococcus sp. 4557 chromosome, complete genomeL-fuculose phosphate aldolase5e-1684.7
NC_015224:2701914:270191427019142702537624Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative aldolase9e-1683.6
NC_008800:2695977:269535726953572695980624Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative aldolase2e-1582.8
NC_016860:3029272:308224330822433082881639Salmonella enterica subsp. enterica serovar Typhimurium strputative aldolase1e-1480.1
NC_003197:3005842:305881330588133059451639Salmonella typhimurium LT2, complete genomehypothetical protein1e-1480.1
NC_016810:3028421:308137430813743082012639Salmonella enterica subsp. enterica serovar Typhimurium strsugar aldolase2e-1479.7
NC_016856:3026426:307905030790503079688639Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative aldolase2e-1479.7
NC_016857:3028421:308137430813743082012639Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74aldolase class II protein YgbL2e-1479.7
NC_016863:2974333:302730230273023027940639Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative aldolase2e-1479.7
NC_009634:547995:551311551311551856546Methanococcus vannielii SB chromosome, complete genomeclass II aldolase/adducin family protein4e-1478.2
NC_011658:2978000:298937929893792990029651Bacillus cereus AH187 chromosome, complete genomeclass II aldolase/adducin family protein1e-1376.3
NC_013416:16493:211892118921821633Aggregatibacter actinomycetemcomitans D11S-1, complete genomeputative aldolase3e-1375.5
NC_013407:333387:355783355783356328546Methanocaldococcus vulcanius M7, complete genomeclass II aldolase/adducin family protein3e-1375.5
NC_009801:3013838:303947530394753040113639Escherichia coli E24377A, complete genomealdolase, class II, AraD/FucA family4e-1374.7
NC_016513:317197:323507323507324139633Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeputative aldolase4e-1374.7
NC_016645:343946:348185348185348784600Pyrobaculum sp. 1860 chromosome, complete genomefuculose-1-phosphate aldolase (fucA)7e-1373.9
NC_014364:2562281:256749925674992568194696Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeclass II aldolase/adducin family protein1e-1273.2
NC_010003:123297:129051129051129695645Petrotoga mobilis SJ95, complete genomeclass II aldolase/adducin family protein1e-1273.2
NC_013850:2846069:284606928460692846689621Klebsiella variicola At-22 chromosome, complete genomeclass II aldolase/adducin family protein1e-1170.1
NC_011283:2836000:283920628392062839826621Klebsiella pneumoniae 342 chromosome, complete genomealdolase1e-1170.1
NC_011283:2836000:285613428561342856754621Klebsiella pneumoniae 342 chromosome, complete genomealdolase1e-1170.1
NC_010516:1382000:140170414017041402351648Clostridium botulinum B1 str. Okra, complete genomealdolase, class II, AraD/FucA subfamily2e-1169.3
NC_017297:1402349:141993414199341420581648Clostridium botulinum F str. 230613 chromosome, complete genomealdolase, class II, AraD/FucA subfamily4e-1168.2
NC_009699:1400000:141964114196411420288648Clostridium botulinum F str. Langeland chromosome, complete genomealdolase4e-1168.2
NC_012563:1464000:148379014837901484437648Clostridium botulinum A2 str. Kyoto, complete genomealdolase, class II, AraD/FucA subfamily5e-1167.8
NC_009637:438037:440145440145440687543Methanococcus maripaludis C7 chromosome, complete genomeclass II aldolase/adducin family protein8e-1167.4
NC_009495:1368000:138599313859931386640648Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeAraD/FucA subfamily aldolase8e-1167.4
NC_009697:1336889:135461313546131355260648Clostridium botulinum A str. ATCC 19397 chromosome, completealdolase8e-1167.4
NC_009698:1337383:135510713551071355754648Clostridium botulinum A str. Hall chromosome, complete genomealdolase8e-1167.4
NC_009975:1374500:139144513914451392017573Methanococcus maripaludis C6, complete genomeclass II aldolase/adducin family protein1e-1066.6
NC_009135:330628:367699367699368244546Methanococcus maripaludis C5, complete genomeclass II aldolase/adducin family protein2e-1065.9
NC_016604:3184855:320800832080083208787780Mycobacterium rhodesiae NBB3 chromosome, complete genomeribulose-5-phosphate 4-epimerase-like epimerase or aldolase5e-1064.7
NC_016771:2933886:294525629452562945804549Bacillus cereus NC7401, complete genomeL-fuculose phosphate aldolase6e-1064.3
NC_017167:129988:139011139011139679669Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1class II aldolase/adducin family protein1e-0963.5
NC_014655:2747399:276328327632832763981699Leadbetterella byssophila DSM 17132 chromosome, complete genomel-ribulose 5-phosphate 4-epimerase1e-0963.5
NC_009617:648000:658277658277658966690Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeL-ribulose-5-phosphate 4-epimerase3e-0962.4
NC_013364:5083949:510903451090345109720687Escherichia coli O111:H- str. 11128, complete genomeL-ribulose 5-phosphate 4-epimerase UlaF4e-0962
NC_015727:1357095:136340013634001364194795Cupriavidus necator N-1 plasmid BB1p, complete sequenceclass II aldolase/adducin-like protein4e-0961.6
NC_006350:1084930:108873710887371089519783Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-0961.6
NC_006322:1994000:200264420026442003339696Bacillus licheniformis ATCC 14580, complete genomeL-ribulose-5-phosphate 4-epimerase9e-0960.5
NC_008570:1143578:114357811435781144210633Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeAraD protein3e-0858.9
NC_009077:1725683:175996917599691760748780Mycobacterium sp. JLS, complete genomeclass II aldolase/adducin family protein4e-0858.5
NC_008705:1790222:182989418298941830673780Mycobacterium sp. KMS, complete genomeclass II aldolase/adducin family protein4e-0858.5
NC_009338:555587:569467569467570246780Mycobacterium gilvum PYR-GCK chromosome, complete genomeclass II aldolase/adducin family protein4e-0858.5
NC_009338:630130:643151643151643930780Mycobacterium gilvum PYR-GCK chromosome, complete genomeclass II aldolase/adducin family protein4e-0858.5
NC_016109:4088259:410649541064954107163669Kitasatospora setae KM-6054, complete genomeputative aldolase6e-0857.8
NC_020211:3535622:355115735511573551849693Serratia marcescens WW4, complete genomeL-ribulose-5-phosphate 4-epimerase1e-0757
NC_020210:1951746:196764619676461968332687Geobacillus sp. GHH01, complete genomeL-ribulose-5-phosphate 4-epimerase1e-0756.6
NC_013411:2767400:278901727890172789703687Geobacillus sp. Y412MC61, complete genomeL-ribulose-5-phosphate 4-epimerase1e-0756.6
NC_014915:1909275:192895319289531929639687Geobacillus sp. Y412MC52 chromosome, complete genomeL-ribulose-5-phosphate 4-epimerase1e-0756.6
NC_014364:3500041:352412235241223524724603Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeclass II aldolase/adducin family protein2e-0756.2
NC_013205:2965110:296662829666282967338711Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,class II aldolase/adducin family protein2e-0755.8
NC_015389:616430:627050627050627712663Coriobacterium glomerans PW2 chromosome, complete genomeclass II aldolase/adducin family protein3e-0755.5
NC_014098:2109416:212518121251812125849669Bacillus tusciae DSM 2912 chromosome, complete genomeclass II aldolase/adducin family protein4e-0755.1
NC_009792:3665369:369468136946813695295615Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-0754.3
NC_014532:2108897:211652021165202117299780Halomonas elongata DSM 2581, complete genomehypothetical protein8e-0753.9
NC_014532:3596097:361952136195213620300780Halomonas elongata DSM 2581, complete genomehypothetical protein8e-0753.9
NC_014921:22828:313703137032101732Mycoplasma fermentans M64 chromosome, complete genomesugar isomerase sgae1e-0653.5
NC_014218:1619982:162355716235571623949393Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeclass II aldolase/adducin family protein1e-0653.5
NC_008312:6617951:663639266363926637150759Trichodesmium erythraeum IMS101, complete genomeclass II aldolase/adducin-like4e-0652
NC_012912:325913:347639347639348331693Dickeya zeae Ech1591, complete genomeclass II aldolase/adducin family protein5e-0651.2