Pre_GI: BLASTP Hits

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Query: NC_011004:4073916:4114946 Rhodopseudomonas palustris TIE-1, complete genome

Start: 4114946, End: 4116298, Length: 1353

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from an iron-rich microbial mat from School Street Marsh in Woods Hole, MA, USA. It grows photoautotrophically with Fe(II), H2, or thiosulfate as the electron donor, photoheterotrophically with a variety of organic carbon sources and chemoheterotrophically in the dark. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014834:2264108:2301627230162723029791353Rhodopseudomonas palustris DX-1 chromosome, complete genomeextracellular ligand-binding receptor0817
NC_006396:320853:3254713254713268411371Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceleucine-binding protein2e-60233
NC_010511:637214:6536716536716549121242Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor4e-30132
NC_010511:6067000:6110790611079061119801191Methylobacterium sp. 4-46 chromosome, complete genomebranched chain amino acid ABC transporter substrate-binding protein3e-28126
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein2e-27124
NC_003047:3202125:3216094321609432172991206Sinorhizobium meliloti 1021, complete genomePUTATIVE PERIPLASMIC BINDING ABC TRANSPORTER PROTEIN1e-23111
NC_014355:220002:2318072318072330091203Candidatus Nitrospira defluvii, complete genomeputative ABC transporter Leu/Ile/Val-binding protein1e-23111
NC_007908:1108494:1151700115170011528931194Rhodoferax ferrireducens T118, complete genomeextracellular ligand-binding receptor2e-20100
NC_017249:2109843:2127210212721021284181209Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1998.2
NC_007643:3799425:3802218380221838034321215Rhodospirillum rubrum ATCC 11170, complete genomeamide-urea binding protein7e-1995.5
NC_011894:7109374:7130915713091571321771263Methylobacterium nodulans ORS 2060, complete genomeExtracellular ligand-binding receptor3e-1893.2
NC_010170:4739925:4743625474362547448961272Bordetella petrii, complete genomeABC transporter substrate-binding protein6e-1892.4
NC_009720:464078:4676714676714690081338Xanthobacter autotrophicus Py2, complete genomeextracellular ligand-binding receptor9e-1891.7
NC_015376:3631392:3634852363485236361381287Burkholderia gladioli BSR3 chromosome chromosome 2, completeExtracellular ligand-binding receptor9e-1788.6
NC_015724:129331:1474211474211486171197Cupriavidus necator N-1 plasmid BB2p, complete sequencebranched-chain amino acid ABC transport system permease protein1e-1688.2
NC_009434:3434381:3459741345974134607931053Pseudomonas stutzeri A1501, complete genomeABC transporter substrate-binding protein4e-1686.7
NC_015422:1694363:1715960171596017171801221Alicycliphilus denitrificans K601 chromosome, complete genomeextracellular ligand-binding receptor5e-1685.9
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor1e-1584.7
NC_010511:4313769:4336960433696043381801221Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor1e-1481.6
NC_014974:1076565:1094174109417410953641191Thermus scotoductus SA-01 chromosome, complete genomeextracellular ligand-binding receptor3e-1480.1
NC_011892:306437:3064373064373076721236Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeExtracellular ligand-binding receptor6e-1479
NC_017082:5925357:5928737592873759299661230Bradyrhizobium sp. S23321, complete genomeABC transporter substrate-binding protein7e-1479
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor2e-1377.8
NC_010511:6067000:6067154606715460683591206Methylobacterium sp. 4-46 chromosome, complete genomeputative ABC branched-chain amino transporter, periplasmic binding protein6e-1375.9
NC_015723:961909:9817559817559829961242Cupriavidus necator N-1 chromosome 2, complete sequenceABC transporter permease8e-1375.5
NC_010623:1961685:2016998201699820182271230Burkholderia phymatum STM815 chromosome 2, complete sequenceextracellular ligand-binding receptor7e-1375.5
NC_010337:98974:1023691023691035711203Heliobacterium modesticaldum Ice1, complete genomebranched chain amino acid abc transporter, amino acid-binding protein6e-1272.4
NC_007953:504939:5285755285755297771203Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein1e-1171.2
NC_012880:913698:9164499164499176931245Dickeya dadantii Ech703, complete genomeExtracellular ligand-binding receptor4e-1169.7
NC_011661:961129:9625519625519636811131Dictyoglomus turgidum DSM 6724, complete genomeExtracellular ligand-binding receptor9e-1168.6
NC_007953:504939:5136815136815149311251Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein1e-1068.2
NC_007336:66000:7432674326755551230Ralstonia eutropha JMP134 megaplasmid, complete sequenceExtracellular ligand-binding receptor6e-1065.9
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family4e-0962.8
NC_011297:787932:7916897916897928191131Dictyoglomus thermophilum H-6-12, complete genomebranched chain amino acid ABC transporter6e-0962.4
NC_014391:4644500:4645341464534146466811341Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeextracellular ligand-binding receptor8e-0962
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor9e-0962
NC_009617:3184924:3218440321844032196211182Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular ligand-binding receptor2e-0860.8
NC_009437:2579161:2601627260162726028081182Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor2e-0860.5
NC_015684:1343251:1365489136548913667691281Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter substrate-binding protein3e-0860.1
NC_015312:6357469:6360162636016263612321071Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeregulatory protein3e-0860.1
NC_009633:2137999:2158402215840221596101209Alkaliphilus metalliredigens QYMF chromosome, complete genomeextracellular ligand-binding receptor3e-0757
NC_014831:786011:7933307933307945381209Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family5e-0756.2
NC_008576:3331825:3339175333917533425313357Magnetococcus sp. MC-1, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)6e-0755.8
NC_011146:2200142:2235574223557422367671194Geobacter bemidjiensis Bem, complete genomeExtracellular ligand-binding receptor6e-0755.8
NC_003454:2080705:2100519210051921016701152Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLeucine-, isoleucine-, valine-, threonine-, and alanine-binding protein9e-0755.5
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor1e-0655.1
NC_014614:2295131:2313207231320723143821176Clostridium sticklandii, complete genomeExtracellular ligand-binding receptor precursor1e-0654.7
NC_020210:2044944:2053712205371220549561245Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter substrate-binding protein2e-0654.3
NC_007503:2010858:2024141202414120253251185Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein2e-0653.9
NC_004369:1051013:1060725106072510619781254Corynebacterium efficiens YS-314, complete genomeputative ABC transporter substrate-binding protein4e-0653.1
NC_015727:1294532:1319872131987213210951224Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter substrate-binding protein7e-0652.4