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Query: NC_010816:1735937 Bifidobacterium longum DJO10A, complete genome

Start: 1735937, End: 1754566, Length: 18630

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015067:2282000*2282000230417622177Bifidobacterium longum subsp. longum JCM 1217, complete genome013870BLASTN svgBLASTP svg
NC_004307:1701071*1701071172571824648Bifidobacterium longum NCC2705, complete genome04205BLASTN svgBLASTP svg
NC_012815:1862373*1862373188610023728Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-56228BLASTN svgBLASTP svg
NC_013721:1581370*1581370160165720288Gardnerella vaginalis 409-05, complete genome6e-1383.8BLASTN svgBLASTP svg