Pre_GI: BLASTN Hits

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Query: NC_010816:1660066 Bifidobacterium longum DJO10A, complete genome

Start: 1660066, End: 1684028, Length: 23963

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015067:2371428*2371428239399922572Bifidobacterium longum subsp. longum JCM 1217, complete genome041210BLASTN svgBLASTP svg
NC_004307:1620500*1620500164011119612Bifidobacterium longum NCC2705, complete genome038310BLASTN svgBLASTP svg
NC_015052:2383865*2383865240599922135Bifidobacterium longum subsp. infantis 157F, complete genome023730BLASTN svgBLASTP svg
NC_018720:2138180*2138180217949941320Bifidobacterium asteroides PRL2011 chromosome, complete genome01205BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome4e-76293BLASTN svgBLASTP svg
NC_012803:3691*36914264438954Micrococcus luteus NCTC 2665, complete genome6e-72280BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome9e-62246BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome4e-39170BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_011886:4376261*4376261440799931739Arthrobacter chlorophenolicus A6, complete genome3e-37165BLASTN svgBLASTP svg
NC_015125:1597600*1597600161635218753Microbacterium testaceum StLB037, complete genome2e-35159BLASTN svgBLASTP svg
NC_006087:111092810928Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-34155BLASTN svgBLASTP svg
NC_008541:4679022*4679022470999930978Arthrobacter sp. FB24 chromosome 1, complete sequence4e-33151BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-31145BLASTN svgBLASTP svg
NC_014550:3839389*3839389387099931611Arthrobacter arilaitensis Re117, complete genome2e-28135BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome2e-28135BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome9e-28133BLASTN svgBLASTP svg
NC_007333:111820218202Thermobifida fusca YX, complete genome9e-28133BLASTN svgBLASTP svg
NC_008711:4579997*4579997460549925503Arthrobacter aurescens TC1, complete genome4e-27131BLASTN svgBLASTP svg
NC_015953:3684065*3684065371159927535Streptomyces sp. SirexAA-E chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_018531:4718904*4718904474449925596Arthrobacter sp. Rue61a chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_015145:4232283*4232283426249930217Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome9e-22113BLASTN svgBLASTP svg
NC_013093:111124311243Actinosynnema mirum DSM 43827, complete genome1e-20109BLASTN svgBLASTP svg
NC_014844:35826773582677360568023004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_014318:369136912533921649Amycolatopsis mediterranei U32 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013165:3146000*3146000318049934500Slackia heliotrinireducens DSM 20476, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006177:3549467*3549467357099921533Symbiobacterium thermophilum IAM 14863, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014218:4424*44242609921676Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011662:114205242052Thauera sp. MZ1T, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008578:2431074*2431074245799926926Acidothermus cellulolyticus 11B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013204:3613824*3613824364749933676Eggerthella lenta DSM 2243, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007958:498549852839523411Rhodopseudomonas palustris BisB5, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007164:2446879*2446879247349926621Corynebacterium jeikeium K411, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015422:111870118701Alicycliphilus denitrificans K601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_021150:5298500*5298500533099932500Azotobacter vinelandii CA6, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012560:5338707*5338707537299934293Azotobacter vinelandii DJ, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008825:4025705*4025705405199926295Methylibium petroleiphilum PM1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006085:2544421*2544421257099926579Propionibacterium acnes KPA171202, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010681:111969219692Burkholderia phytofirmans PsJN chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_014039:2479500*2479500250599926500Propionibacterium acnes SK137 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014323:111610816108Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014722:115359353593Burkholderia rhizoxinica HKI 454, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015389:2101841*2101841212999928159Coriobacterium glomerans PW2 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015677:112102721027Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome3e-0661.9BLASTN svgBLASTP svg