Pre_GI: BLASTP Hits

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Query: NC_010816:2252732:2262462 Bifidobacterium longum DJO10A, complete genome

Start: 2262462, End: 2262794, Length: 333

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013714:1376500:139933313993331399551219Bifidobacterium dentium Bd1, complete genomeCRISPR-associated Cas23e-26117
NC_016801:36000:404654046540794330Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeCRISPR-associated protein3e-26117
NC_016790:31240:389513895139280330Corynebacterium diphtheriae VA01 chromosome, complete genomeCRISPR-associated protein3e-26117
NC_009952:366959:396006396006396350345Dinoroseobacter shibae DFL 12, complete genomeCRISPR-associated protein Cas24e-1993.2
NC_018721:297906:319943319943320287345Psychroflexus torquis ATCC 700755 chromosome, complete genomeCRISPR-associated protein Cas21e-1478.6
NC_014033:1564733:157004915700491570357309Prevotella ruminicola 23 chromosome, complete genomeCRISPR-associated protein Cas21e-1375.1
NC_008578:2206500:221016422101642210490327Acidothermus cellulolyticus 11B, complete genomeCRISPR-associated protein Cas22e-1374.3
NC_016001:1893685:189947218994721899882411Flavobacterium branchiophilum, complete genomeputative CRISPR-associated (Cas) protein1e-1168.6
NC_010644:254725:265602265602265928327Elusimicrobium minutum Pei191, complete genomeCRISPR-associated Cas2 family protein2e-1168.2
NC_014363:1396912:140657714065771406912336Olsenella uli DSM 7084 chromosome, complete genomeCRISPR-associated protein, Cas2 family1e-1065.5
NC_015389:2030154:204113720411372041445309Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cas2 family2e-1064.7
NC_013410:155236:165224165224165559336Fibrobacter succinogenes subsp. succinogenes S85 chromosome,CRISPR-associated protein Cas22e-1064.3
NC_007929:111092:119835119835120140306Lactobacillus salivarius subsp. salivarius UCC118, complete genomeCRISPR-associated protein6e-1062.8
NC_015738:2652500:268322526832252683560336Eggerthella sp. YY7918, complete genomehypothetical protein8e-1062.4
NC_009785:1414892:142534214253421425665324Streptococcus gordonii str. Challis substr. CH1, complete genomeCRISPR-associated protein Cas22e-0960.8
NC_013016:354000:368248368248368556309Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein3e-0960.5
NC_017501:1913360:192129519212951921621327Neisseria meningitidis 8013, complete genomehypothetical protein3e-0960.5
NC_015433:1315363:132247113224711322794324Streptococcus suis ST3 chromosome, complete genomeCRISPR-associated protein Cas23e-0960.5
NC_017517:1915842:192377519237751924101327Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein1e-0858.2
NC_011134:1360122:136812913681291368452324Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeCRISPR assocaiated protein Cas21e-0755.1
NC_004070:747146:748027748027748353327Streptococcus pyogenes MGAS315, complete genomehypothetical protein5e-0753.1
NC_004606:1107500:114840311484031148744342Streptococcus pyogenes SSI-1, complete genomehypothetical protein6e-0752.8