Pre_GI: BLASTN Hits

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Query: NC_010803:1132500 Chlorobium limicola DSM 245, complete genome

Start: 1132500, End: 1159018, Length: 26519

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011060:1288862*1288862131583126970Pelodictyon phaeoclathratiforme BU-1, complete genome02466BLASTN svgBLASTP svg
NC_008639:25451072545107258813543029Chlorobium phaeobacteroides DSM 266, complete genome02232BLASTN svgBLASTP svg
NC_002932:1798869*1798869182453825670Chlorobium tepidum TLS, complete genome6e-100373BLASTN svgBLASTP svg
NC_010803:24270524270526959926895Chlorobium limicola DSM 245, complete genome2e-81311BLASTN svgBLASTP svg
NC_007514:335085*33508535739322309Chlorobium chlorochromatii CaD3, complete genome3e-80307BLASTN svgBLASTP svg
NC_002516:3079850*3079850310675226903Pseudomonas aeruginosa PAO1, complete genome1e-51212BLASTN svgBLASTP svg
NC_010803:24745542474554250459930046Chlorobium limicola DSM 245, complete genome8e-47196BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome5e-42180BLASTN svgBLASTP svg
NC_011060:20992552099255213104831794Pelodictyon phaeoclathratiforme BU-1, complete genome3e-34155BLASTN svgBLASTP svg
NC_011059:65414*6541410535339940Prosthecochloris aestuarii DSM 271, complete genome3e-34155BLASTN svgBLASTP svg
NC_011026:1681852*1681852170163619785Chloroherpeton thalassium ATCC 35110, complete genome3e-31145BLASTN svgBLASTP svg
NC_011059:2272747*2272747229869125945Prosthecochloris aestuarii DSM 271, complete genome4e-30141BLASTN svgBLASTP svg
NC_010803:1436397*1436397146341227016Chlorobium limicola DSM 245, complete genome7e-29137BLASTN svgBLASTP svg
NC_008639:15739711573971159906525095Chlorobium phaeobacteroides DSM 266, complete genome2e-23119BLASTN svgBLASTP svg
NC_010831:93196193196196064428684Chlorobium phaeobacteroides BS1, complete genome1e-20109BLASTN svgBLASTP svg
NC_007514:14753231475323149832423002Chlorobium chlorochromatii CaD3, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015731:111668216682Nitrosomonas sp. Is79A3 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015224:44261674426167445165025484Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-1383.8BLASTN svgBLASTP svg
NC_012912:24270924270927148728779Dickeya zeae Ech1591, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010831:40000400006310923110Chlorobium phaeobacteroides BS1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012779:33168773316877333727020394Edwardsiella ictaluri 93-146, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013508:31889783188978324937660399Edwardsiella tarda EIB202, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019892:1113114*1113114113750824395Singulisphaera acidiphila DSM 18658 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010803:15738491573849160198428136Chlorobium limicola DSM 245, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003198:1621347*1621347164626724921Salmonella enterica subsp. enterica serovar Typhi str. CT18,8e-0763.9BLASTN svgBLASTP svg
NC_004631:13258171325817135139825582Salmonella enterica subsp. enterica serovar Typhi Ty2, complete8e-0763.9BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete8e-0763.9BLASTN svgBLASTP svg
NC_005126:274000*27400029651122512Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_005126:5188976*5188976521454825573Photorhabdus luminescens subsp. laumondii TTO1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006511:1579776*1579776160172721952Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC8e-0763.9BLASTN svgBLASTP svg
NC_006905:15090931509093153636427272Salmonella enterica subsp. enterica serovar Choleraesuis str8e-0763.9BLASTN svgBLASTP svg
NC_010102:17031721703172172512221951Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-0763.9BLASTN svgBLASTP svg
NC_010102:27623042762304278909926796Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-0763.9BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-0763.9BLASTN svgBLASTP svg
NC_011149:30955630955633763728082Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-0763.9BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,8e-0763.9BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-0763.9BLASTN svgBLASTP svg
NC_011080:33312133312135949426374Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-0763.9BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-0763.9BLASTN svgBLASTP svg
NC_012912:84433984433986800523667Dickeya zeae Ech1591, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012779:95755895755898306025503Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012779:25861752586175261323427060Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011901:342777*34277736771724941Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-0661.9BLASTN svgBLASTP svg