Pre_GI: BLASTP Hits

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Query: NC_010803:242705:262989 Chlorobium limicola DSM 245, complete genome

Start: 262989, End: 263324, Length: 336

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009337:715500:755054755054755389336Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeXRE family transcriptional regulator2e-33140
NC_007512:2024880:205136620513662051701336Pelodictyon luteolum DSM 273, complete genometranscriptional regulator, XRE family5e-33139
NC_019973:5716453:574877357487735749108336Mesorhizobium australicum WSM2073, complete genomehypothetical protein3e-2097.1
NC_014923:5787493:581981358198135820148336Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehypothetical protein3e-2097.1
NC_015675:6342164:637448463744846374819336Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein3e-2097.1
NC_014973:4174668:419639041963904196626237Geobacter sp. M18 chromosome, complete genome4e-0960.1
NC_016803:2431672:245549924554992455840342Desulfovibrio desulfuricans ND132 chromosome, complete genomehelix-turn-helix domain-containing protein5e-0960.1
NC_010815:40357:458564585646209354Geobacter lovleyi SZ plasmid pGLOV01, complete sequencetranscriptional regulator, XRE family8e-0958.9
NC_015675:6276357:632333663233366323668333Mesorhizobium opportunistum WSM2075 chromosome, complete genomeXRE family transcriptional regulator5e-0753.1
NC_019973:5694620:569762556976255697957333Mesorhizobium australicum WSM2073, complete genomeHelix-turn-helix protein5e-0753.1
NC_014923:5765660:576866557686655768997333Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix domain protein5e-0753.1
NC_009615:2503465:254453825445382544858321Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA-binding protein1e-0652
NC_014816:2357000:235742323574232357905483Asticcacaulis excentricus CB 48 chromosome 1, complete sequencehelix-turn-helix domain protein2e-0651.2
NC_016609:7608723:762388276238827624166285Niastella koreensis GR20-10 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.2
NC_010725:3961981:396691939669193967263345Methylobacterium populi BJ001, complete genometranscriptional regulator, XRE family3e-0650.4