Pre_GI: BLASTP Hits

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Query: NC_010803:1573849:1577777 Chlorobium limicola DSM 245, complete genome

Start: 1577777, End: 1578196, Length: 420

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010831:2078329:211752621175262117921396Chlorobium phaeobacteroides BS1, complete genomeDNA polymerase beta domain protein region2e-36150
NC_014394:1373602:137727313772731377686414Gallionella capsiferriformans ES-2 chromosome, complete genomeDNA polymerase beta domain-containing protein region3e-35147
NC_010524:2530841:253084125308412531227387Leptothrix cholodnii SP-6, complete genomeDNA polymerase, beta domain protein region2e-34144
NC_007512:2024880:202813720281372028538402Pelodictyon luteolum DSM 273, complete genomehypothetical protein6e-33139
NC_004757:2412161:241822524182252418638414Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein4e-22103
NC_013173:3679326:368467236846723685070399Desulfomicrobium baculatum DSM 4028, complete genomeDNA polymerase beta domain protein region6e-1166.2
NC_012108:2220983:222364822236482224052405Desulfobacterium autotrophicum HRM2, complete genomeputative DNA polymerase (beta-like region)2e-1064.7
NC_008789:835909:838797838797839168372Halorhodospira halophila SL1, complete genomeDNA polymerase, beta domain protein region4e-1063.2
NC_011296:1542835:155959815595981559993396Thermodesulfovibrio yellowstonii DSM 11347, complete genomenucleotidyltransferase, putative8e-0855.8
NC_015589:1240197:126462612646261265021396Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeDNA polymerase beta domain-containing protein1e-0755.5
NC_014652:1091610:109297210929721093412441Caldicellulosiruptor hydrothermalis 108 chromosome, completeDNA polymerase beta domain protein region3e-0753.5
NC_015565:1920329:192311519231151923519405Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA polymerase beta domain-containing protein region4e-0753.5
NC_016830:6499234:651320865132086513603396Pseudomonas fluorescens F113 chromosome, complete genomeDNA polymerase, beta domain-containing protein1e-0652
NC_015732:529201:550494550494550931438Spirochaeta caldaria DSM 7334 chromosome, complete genomeDNA polymerase beta domain-containing protein region4e-0650.1