Pre_GI: BLASTN Hits

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Query: NC_010793:721944 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 721944, End: 745827, Length: 23884

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome01287BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome07218BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome2e-180640BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome06530BLASTN svgBLASTP svg
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome3e-160573BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome05138BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome2e-47198BLASTN svgBLASTP svg
NC_010793:1922000*1922000196058138582Orientia tsutsugamushi str. Ikeda, complete genome04657BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome4e-42180BLASTN svgBLASTP svg
NC_010793:15089741508974153217323200Orientia tsutsugamushi str. Ikeda, complete genome04657BLASTN svgBLASTP svg
NC_010793:41684941684944002323175Orientia tsutsugamushi str. Ikeda, complete genome03368BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome02950BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome02266BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome02141BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome014970BLASTN svgBLASTP svg
NC_010793:30488*304885039219905Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome09585BLASTN svgBLASTP svg
NC_012730:131445*13144515343621992Rickettsia peacockii str. Rustic, complete genome5e-20107BLASTN svgBLASTP svg