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Query: NC_010793:357000 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 357000, End: 375626, Length: 18627

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome05065BLASTN svgBLASTP svg
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome01750BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome03511BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome03546BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome03586BLASTN svgBLASTP svg
NC_010793:1922000*1922000196058138582Orientia tsutsugamushi str. Ikeda, complete genome03608BLASTN svgBLASTP svg
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome04016BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome04016BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome04100BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome04988BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome3e-33151BLASTN svgBLASTP svg
NC_007109:40150040150041909917600Rickettsia felis URRWXCal2, complete genome3e-24121BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_006142:140853*14085318445043598Rickettsia typhi str. Wilmington, complete genome1e-0765.9BLASTN svgBLASTP svg