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Query: NC_010793:1922000 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 1922000, End: 1960581, Length: 38582

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010793:15089741508974153217323200Orientia tsutsugamushi str. Ikeda, complete genome09829BLASTN svgBLASTP svg
NC_010793:17233651723365174939626032Orientia tsutsugamushi str. Ikeda, complete genome07763BLASTN svgBLASTP svg
NC_010793:49650049650051508118582Orientia tsutsugamushi str. Ikeda, complete genome05303BLASTN svgBLASTP svg
NC_010793:41684941684944002323175Orientia tsutsugamushi str. Ikeda, complete genome05301BLASTN svgBLASTP svg
NC_010793:81219*8121910439223174Orientia tsutsugamushi str. Ikeda, complete genome04657BLASTN svgBLASTP svg
NC_010793:72194472194474582723884Orientia tsutsugamushi str. Ikeda, complete genome04657BLASTN svgBLASTP svg
NC_010793:12878771287877130645418578Orientia tsutsugamushi str. Ikeda, complete genome04423BLASTN svgBLASTP svg
NC_010793:11582791158279117659918321Orientia tsutsugamushi str. Ikeda, complete genome04220BLASTN svgBLASTP svg
NC_010793:1628500*1628500164809919600Orientia tsutsugamushi str. Ikeda, complete genome04173BLASTN svgBLASTP svg
NC_010793:16957161695716171809922384Orientia tsutsugamushi str. Ikeda, complete genome03925BLASTN svgBLASTP svg
NC_010793:12611112611114549019380Orientia tsutsugamushi str. Ikeda, complete genome03691BLASTN svgBLASTP svg
NC_010793:357000*35700037562618627Orientia tsutsugamushi str. Ikeda, complete genome03608BLASTN svgBLASTP svg
NC_010793:14688491468849148809919251Orientia tsutsugamushi str. Ikeda, complete genome03604BLASTN svgBLASTP svg
NC_010793:66850066850068609917600Orientia tsutsugamushi str. Ikeda, complete genome03503BLASTN svgBLASTP svg
NC_010793:1811401*1811401187154360143Orientia tsutsugamushi str. Ikeda, complete genome03140BLASTN svgBLASTP svg
NC_010793:54104054104057414833109Orientia tsutsugamushi str. Ikeda, complete genome02006BLASTN svgBLASTP svg
NC_010793:30488*304885039219905Orientia tsutsugamushi str. Ikeda, complete genome01540BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome2e-150541BLASTN svgBLASTP svg
NC_007354:569321*56932160009930779Ehrlichia canis str. Jake, complete genome1e-18103BLASTN svgBLASTP svg
NC_006831:664000*66400068952525526Ehrlichia ruminantium str. Gardel, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_006832:668913*66891369389724985Ehrlichia ruminantium str. Welgevonden, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_007799:647514*64751467659429081Ehrlichia chaffeensis str. Arkansas, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_014228:4360676*4360676438499224317Xenorhabdus nematophila ATCC 19061, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_006677:2575345*2575345259598120637Gluconobacter oxydans 621H, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009350:13764513764516449926855Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete8e-1177.8BLASTN svgBLASTP svg
NC_020300:131782*13178215008918308Bartonella australis Aust/NH1, complete genome5e-0661.9BLASTN svgBLASTP svg