Pre_GI: BLASTP Hits

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Query: NC_010793:668500:674985 Orientia tsutsugamushi str. Ikeda, complete genome

Start: 674985, End: 676007, Length: 1023

Host Lineage: Orientia tsutsugamushi; Orientia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This organism is the causative agent of scrub typhus, and like other members of the Rickettsiales is an obligate intracellular organism. Scrub typhus, which occurs in rural and agricultural areas, is one of the most common infectious diseases in southeast Asia where an estimated 1 million cases occur each year. Many cases are mild, but if left untreated, a variety of serious illnesses can arise and fatality rates can range from 1-35%. Transmission occurs via an insect vector through the bite of the larval trombiculid mite (chiggers). The bacterium is transmitted transovarially in mites (from females to their offspring).




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010793:496500:4981554981554991771023Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-176619
NC_009488:903000:9140619140619153051245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-141501
NC_009488:803873:8177908177908190341245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-141501
NC_009488:1952640:1956004195600419572481245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-141501
NC_009488:1465781:1470586147058614718301245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-141501
NC_009488:1165927:1178998117899811802421245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase3e-141501
NC_009488:1917000:1918697191869719199411245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase4e-141501
NC_009488:1673756:1676815167681516780591245Orientia tsutsugamushi str. Boryong, complete genomephage-related integrase4e-141501
NC_010793:1811401:1846220184622018473381119Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase5e-132470
NC_010793:1723365:1726048172604817272471200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-101370
NC_010793:1695716:1709642170964217108411200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-101369
NC_010793:1628500:1631109163110916323081200Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-101369
NC_009488:57889:608196081961682864Orientia tsutsugamushi str. Boryong, complete genome2e-90332
NC_009488:1249492:126651512665151267378864Orientia tsutsugamushi str. Boryong, complete genome2e-90332
NC_010793:30488:468754687547690816Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-80300
NC_009488:1126000:112868711286871129430744Orientia tsutsugamushi str. Boryong, complete genome1e-72273
NC_014972:480355:4934964934964946591164Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein4e-34145
NC_010793:1922000:1940379194037919415181140Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-33143
NC_010793:1811401:184388918438891844155267Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase1e-26120
NC_010793:1508974:153172715317271532173447Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase8e-24111
NC_010793:496500:512993512993513583591Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase2e-22106
NC_009434:1580205:1597972159797215993751404Pseudomonas stutzeri A1501, complete genomeintegrase6e-22105
NC_012912:1053618:1066900106690010682461347Dickeya zeae Ech1591, complete genomeintegrase family protein5e-21102
NC_013194:634039:645740645740646480741Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeintegrase family protein3e-2099.4
NC_008609:3921113:3938275393827539394831209Pelobacter propionicus DSM 2379, complete genomephage integrase family protein1e-1790.9
NC_006569:69939:8572185721869231203Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencesite-specific recombinase, phage integrase family1e-1377.4
NC_014972:1126426:1145414114541411465951182Desulfobulbus propionicus DSM 2032 chromosome, complete genomeintegrase family protein5e-1375.5
NC_009438:3019552:3033201303320130345321332Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein6e-1375.1
NC_016026:296951:3102273102273113781152Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage integrase family protein2e-1273.9
NC_015580:141379:1621711621711633671197Novosphingobium sp. PP1Y, complete genomephage integrase5e-1272.4
NC_010793:416849:438829438829439212384Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase6e-1272
NC_015968:3301958:3321719332171933230081290Enterobacter asburiae LF7a chromosome, complete genomeintegrase family protein2e-1170.1
NC_016514:3573400:3580503358050335818131311Enterobacter cloacae EcWSU1 chromosome, complete genomeprophage CP4-57 integrase2e-1170.1
NC_015726:2817352:2824216282421628254301215Cupriavidus necator N-1 chromosome 1, complete sequencephage-like integrase3e-1169.7
NC_009801:2898426:2906374290637429076841311Escherichia coli E24377A, complete genomephage integrase family protein1e-1067.4
NC_015593:2553500:2557151255715125582871137Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeintegrase family protein2e-1067.4
NC_012947:1106000:1116151111615111173801230Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeintegrase2e-1067
NC_012967:2669182:2677417267741726786461230Escherichia coli B str. REL606 chromosome, complete genomeFels-2 prophage protein2e-1067
NC_004463:925140:940715940715941704990Bradyrhizobium japonicum USDA 110, complete genomeprobable site-specific integrase/recombinase2e-1067
NC_015593:2553500:2581047258104725822111165Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete2e-1067
NC_016616:134449:1400551400551411311077Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase XerD2e-1066.6
NC_015186:491930:5133815133815146521272Acidiphilium multivorum AIU301, complete genomephage integrase family protein3e-1066.2
NC_007626:3996000:4009811400981140109021092Magnetospirillum magneticum AMB-1, complete genomeIntegrase4e-1065.9
NC_009792:3665369:3673469367346936747401272Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-1065.9
NC_007434:1809946:1853156185315618541751020Burkholderia pseudomallei 1710b chromosome I, complete sequenceprobable site-specific8e-1064.7
NC_006350:3865584:3873083387308338740841002Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid recombinase8e-1064.7
NC_015761:299386:3263733263733277281356Salmonella bongori NCTC 12419, complete genomeprophage integrase1e-0964.3
NC_008789:350650:3635873635873647261140Halorhodospira halophila SL1, complete genomephage integrase family protein1e-0964.3
NC_016026:2082500:2095118209511820962931176Micavibrio aeruginosavorus ARL-13 chromosome, complete genomephage integrase family protein2e-0963.9
NC_011901:1860887:1864546186454618656311086Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeintegrase family protein2e-0963.5
NC_010682:3313944:3349996334999633510511056Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein2e-0963.5
NC_015381:429940:4389684389684400111044Burkholderia gladioli BSR3 chromosome 1, complete sequencephage integrase2e-0963.5
NC_004578:3817330:3824867382486738260421176Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family3e-0963.2
NC_004547:611178:6162356162356173621128Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeshufflon-specific DNA recombinase2e-0963.2
NC_008060:2913671:2934382293438229354251044Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencephage integrase3e-0962.8
NC_008542:483761:4912204912204922631044Burkholderia cenocepacia HI2424 chromosome 1, complete sequencephage integrase family protein3e-0962.8
NC_010084:534937:541878541878542864987Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein5e-0962.4
NC_020409:621792:6725666725666737861221Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative prophage P4 integrase5e-0962.4
NC_015224:3587500:3594873359487335961561284Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative prophage integrase4e-0962.4
NC_012856:3000839:3011439301143930124941056Ralstonia pickettii 12D chromosome 1, complete genomeintegrase family protein7e-0961.6
NC_016602:3122700:3133060313306031342471188Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage integrase family protein8e-0961.6
NC_011745:3245000:3263297326329732645501254Escherichia coli ED1a chromosome, complete genomeIntegrase from prophage1e-0861.2
NC_008740:443274:4525464525464537361191Marinobacter aquaeolei VT8, complete genomephage integrase family protein1e-0860.8
NC_007492:857428:8773888773888786441257Pseudomonas fluorescens PfO-1, complete genomePhage integrase1e-0860.8
NC_011958:976500:9867399867399880431305Rhodobacter sphaeroides KD131 chromosome 2, complete genomePhage integrase1e-0860.8
CP002185:2919752:2927054292705429282831230Escherichia coli W, complete genomeputative prophage integrase3e-0860.1
AP010958:3238742:3244745324474532459741230Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative integrase3e-0860.1
CP002516:1165726:1177574117757411788031230Escherichia coli KO11, complete genomeintegrase family protein3e-0860.1
NC_011415:3006794:3014953301495330161821230Escherichia coli SE11 chromosome, complete genomephage integrase3e-0860.1
NC_013353:3238742:3244745324474532459741230Escherichia coli O103:H2 str. 12009, complete genomeintegrase3e-0860.1
NC_013361:3651150:3659305365930536605341230Escherichia coli O26:H11 str. 11368 chromosome, complete genomeintegrase3e-0860.1
NC_016902:1165726:1177574117757411788031230Escherichia coli KO11FL chromosome, complete genomeintegrase family protein3e-0860.1
NC_020911:4465500:4465774446577444670331260Octadecabacter antarcticus 307, complete genomeDNA integration/recombination/inversion protein2e-0860.1
NC_014311:1635408:1647196164719616482151020Ralstonia solanacearum PSI07 chromosome, complete genomephage integrase domain2e-0860.1
NC_011094:2791719:2797034279703427983051272Salmonella enterica subsp. enterica serovar Schwarzengrund strphage integrase family protein2e-0860.1
NC_014121:398012:4134664134664146621197Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative integrase3e-0859.7
NC_015633:2801321:2823882282388228250841203Vibrio anguillarum 775 chromosome chromosome I, complete sequenceDNA integration/recombination/inversion protein3e-0859.7
NC_020209:3874844:3880916388091638821751260Pseudomonas poae RE*1-1-14, complete genomeintegrase family protein3e-0859.7
NC_012918:1444333:1462957146295714641771221Geobacter sp. M21 chromosome, complete genomeintegrase family protein3e-0859.3
NC_013941:3300000:3313387331338733146161230Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephage integrase family protein3e-0859.3
NC_010793:721944:735204735204735545342Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase5e-0858.9
NC_010793:81219:944439444394784342Orientia tsutsugamushi str. Ikeda, complete genomeputative integrase5e-0858.9
NC_015379:6226661:6232535623253562336681134Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative phage integrase7e-0858.5
NC_007626:1863747:187427318742731875064792Magnetospirillum magneticum AMB-1, complete genomeIntegrase7e-0858.5
NC_009778:4014026:4042971404297140442331263Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-0858.5
NC_011000:183928:2032112032112043381128Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative plasmid recombinase7e-0858.5
NC_011094:3778000:3804662380466238059241263Salmonella enterica subsp. enterica serovar Schwarzengrund strsite-specific recombinase, phage integrase family protein6e-0858.5
NC_015519:2489728:250341725034172504274858Tepidanaerobacter sp. Re1 chromosome, complete genomeintegrase family protein6e-0858.5
NC_008260:2340824:2352446235244623535491104Alcanivorax borkumensis SK2, complete genomeshufflon-specific DNA recombinase6e-0858.5
NC_020063:3690308:3710476371047637115491074Enterobacteriaceae bacterium strain FGI 57, complete genomeIntegrase9e-0858.2
NC_014355:288000:2962442962442972841041Candidatus Nitrospira defluvii, complete genomeputative phage integrase9e-0858.2
NC_013456:212150:2178712178712190881218Vibrio sp. Ex25 chromosome 1, complete genomeintegrase9e-0858.2
NC_012796:1600600:1605716160571616067561041Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase9e-0858.2
NC_010067:191190:2151992151992164701272Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-0858.2
NC_013961:73037:9431494314955371224Erwinia amylovora, complete genomeIntegrase1e-0757.8
NC_013971:73037:9431494314955371224Erwinia amylovora ATCC 49946 chromosome, complete genomeintegrase1e-0757.8
NC_009662:1329788:1339881133988113411191239Nitratiruptor sp. SB155-2, complete genomephage integrase family site specific recombinase1e-0757.8
NC_002678:4618555:4643427464342746446141188Mesorhizobium loti MAFF303099, complete genomesymbiosis island integrase1e-0757.8
NC_009832:110239:1164641164641176331170Serratia proteamaculans 568, complete genomeintegrase family protein1e-0757.8
NC_014034:1036652:1041679104167910429081230Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase1e-0757.8
NC_008800:1090000:1114774111477411160031230Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative prophage integrase1e-0757.8
NC_016845:1285435:1288374128837412895371164Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,site-specific recombinase, phage integrase family1e-0757.4
NC_009800:289000:2918312918312929911161Escherichia coli HS, complete genomesite-specific recombinase, phage integrase family1e-0757.4
NC_017328:303987:3104213104213115811161Shigella flexneri 2002017 chromosome, complete genomephage integrase family site-specific recombinase2e-0757.4
NC_008258:269806:2774612774612786211161Shigella flexneri 5 str. 8401, complete genomeputative integrase2e-0757.4
NC_012988:4633930:4641261464126146422741014Methylobacterium extorquens DM4, complete genomeintegrase2e-0757.4
NC_011601:2854178:2869825286982528710871263Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeintegrase2e-0757
NC_010172:4185904:4194558419455841955621005Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-0757
NC_011768:5900500:5905877590587759071061230Desulfatibacillum alkenivorans AK-01, complete genomeintegrase family protein2e-0757
NC_011283:4212000:4229167422916742303301164Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase3e-0756.2
NC_007298:2689731:2722914272291427243591446Dechloromonas aromatica RCB, complete genomePhage integrase3e-0756.2
NC_008577:4533574:4539288453928845405021215Shewanella sp. ANA-3 chromosome 1, complete sequencephage integrase family protein3e-0756.2
NC_015422:910292:9166939166939177841092Alicycliphilus denitrificans K601 chromosome, complete genomeintegrase family protein4e-0756.2
NC_011745:3443371:3443889344388934450131125Escherichia coli ED1a chromosome, complete genomeShufflon-specific DNA recombinase5e-0755.8
NC_013722:3117442:3131487313148731325811095Xanthomonas albilineans, complete genomeputative shufflon-specific dna recombinase protein4e-0755.8
NC_008782:841134:851174851174852145972Acidovorax sp. JS42, complete genomephage integrase family protein4e-0755.8
NC_015275:911999:9149009149009160301131Clostridium lentocellum DSM 5427 chromosome, complete genomeintegrase family protein4e-0755.8
NC_014650:2969866:2987769298776929889231155Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase4e-0755.8
NC_010694:1052722:1083497108349710846601164Erwinia tasmaniensis, complete genomePhage integrase4e-0755.8
NC_011883:1422650:1441887144188714430951209Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein5e-0755.5
CP002797:4775780:4790688479068847918661179Escherichia coli NA114, complete genomePutative integrase6e-0755.5
NC_012214:2805297:282140528214052822034630Erwinia pyrifoliae Ep1/96, complete genomephage integrase family, fragment8e-0755.1
NC_010644:1540249:1550592155059215516051014Elusimicrobium minutum Pei191, complete genomeintegrase family protein8e-0755.1
NC_007759:2179000:2183062218306221841561095Syntrophus aciditrophicus SB, complete genomephage integrase family protein8e-0755.1
NC_012108:1973861:1990732199073219918861155Desulfobacterium autotrophicum HRM2, complete genometyrosine recombinase XerD7e-0755.1
NC_008554:4839116:4849957484995748512041248Syntrophobacter fumaroxidans MPOB, complete genomephage integrase family protein1e-0654.7
NC_012751:1538500:1538746153874615398911146Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeAPSE-2 prophage; integrase1e-0654.7
NC_015663:1356982:1363591136359113647751185Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein9e-0754.7
NC_016902:44744:6181561815630381224Escherichia coli KO11FL chromosome, complete genomeintegrase family protein1e-0654.3
CP002516:44744:6181561815630381224Escherichia coli KO11, complete genomeintegrase family protein1e-0654.3
CP002185:4035502:4043035404303540442581224Escherichia coli W, complete genomeputative integrase1e-0654.3
NC_008380:4968492:497566649756664976619954Rhizobium leguminosarum bv. viciae 3841, complete genomeputative shufflon-specific DNA recombinase1e-0654.3
NC_012880:3529017:3548469354846935495931125Dickeya dadantii Ech703, complete genomeintegrase family protein1e-0654.3
NC_009076:3876733:388817438881743888692519Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family2e-0653.9
NC_009659:543000:548709548709549695987Janthinobacterium sp. Marseille chromosome, complete genomephage integrase site specific recombinase1e-0653.9
NC_003919:2435058:245801424580142458607594Xanthomonas axonopodis pv. citri str. 306, complete genomeDNA recombinase1e-0653.9
NC_007760:4055860:408811340881134088940828Anaeromyxobacter dehalogenans 2CP-C, complete genomePhage integrase1e-0653.9
NC_004547:3866439:3878830387883038800561227Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage integrase2e-0653.5
NC_007575:1694877:1714292171429217153981107Sulfurimonas denitrificans DSM 1251, complete genomePhage integrase2e-0653.5
NC_015458:2338437:2340983234098323420711089Pusillimonas sp. T7-7 chromosome, complete genomesite-specific recombinase, phage integrase family2e-0653.5
NC_008609:1976403:2001971200197120032541284Pelobacter propionicus DSM 2379, complete genomephage integrase family protein2e-0653.5
NC_008800:1300500:1308992130899213101101119Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative integrase/recombinase protein3e-0653.1
NC_015663:5253242:5261147526114752623521206Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative integrase3e-0653.1
NC_008800:4488112:4502800450280045040141215Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative phage integrase3e-0653.1
NC_013943:2705983:2705983270598327071761194Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeintegrase family protein3e-0653.1
NC_012108:2037429:2046862204686220479591098Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein3e-0653.1
NC_007298:1129889:1137870113787011388861017Dechloromonas aromatica RCB, complete genomePhage integrase2e-0653.1
NC_020911:1859210:1864378186437818654661089Octadecabacter antarcticus 307, complete genomeputative integrase3e-0652.8
NC_014355:1223243:1233478123347812345481071Candidatus Nitrospira defluvii, complete genomeputative integrase3e-0652.8
NC_004578:568236:5847805847805860211242Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family4e-0652.8
NC_008253:334467:3609423609423622611320Escherichia coli 536, complete genomephage integrase4e-0652.4
NC_013861:728648:7416787416787429101233Legionella longbeachae NSW150, complete genomephage-related integrase4e-0652.4
NC_008700:367949:3848133848133863601548Shewanella amazonensis SB2B, complete genomehypothetical protein6e-0652
NC_009648:3224495:3231820323182032330671248Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative integrase7e-0652
NC_008782:3110744:3127686312768631290201335Acidovorax sp. JS42, complete genomephage integrase family protein9e-0651.6
NC_013508:876431:8847268847268859491224Edwardsiella tarda EIB202, complete genomeputative site specific integrase1e-0551.2